Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq767 102 2e-16 seq710 102 2e-16 seq244 102 2e-16 seq251 93.3 8e-14 >seq767 Length=59936 Score = 102 bits (112), Expect = 2e-16 Identities = 175/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || |||||||||| || || ||| |||||||| ||||||||| Sbjct 59470 CCGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTATCGTAAATACCC 59529 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || ||||| ||||| | | | | | |||||||||||| | || || | | || Sbjct 59530 TCGATGCTGTCATCCTTCATGTCGATAAGGAAGCACGATGCGAGCTGTGCCTGGGGAGTA 59589 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || | || || |||||||| || || || || || | | ||||| | || Sbjct 59590 CCCGCGCTGAAAAGCGTGGGGGAGGCGTGTGTGAAGTATTTGTTGGACATATAGTTGTAG 59649 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || |||||| ||| | |||||| ||||| ||||||||||| |||||||| |||||| Sbjct 59650 GTCTCAATGGCAGCCTCGATGTCGCTGCCGTGGATGCCGACAGCGACACGCATGATCATG 59709 Query 95026 TCCTGAGGGCGCTC 95039 | ||| || | ||| Sbjct 59710 TGCTGTGGTCTCTC 59723 Score = 93.3 bits (102), Expect = 8e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||||||| ||| || |||||||||| |||| ||||| ||||| | ||| |||| ||| Sbjct 59082 GCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGCAAG 59141 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATT 94493 ||||||||||||||| |||||||| || | ||| || Sbjct 59142 GCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTT 59177 >seq710 Length=16846 Score = 102 bits (112), Expect = 2e-16 Identities = 175/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || |||||||||| || || ||| |||||||| ||||||||| Sbjct 16380 CCGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTATCGTAAATACCC 16439 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || ||||| ||||| | | | | | |||||||||||| | || || | | || Sbjct 16440 TCGATGCTGTCATCCTTCATGTCGATAAGGAAGCACGATGCGAGCTGTGCCTGGGGAGTA 16499 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || | || || |||||||| || || || || || | | ||||| | || Sbjct 16500 CCCGCGCTGAAAAGCGTGGGGGAGGCGTGTGTGAAGTATTTGTTGGACATATAGTTGTAG 16559 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || |||||| ||| | |||||| ||||| ||||||||||| |||||||| |||||| Sbjct 16560 GTCTCAATGGCAGCCTCGATGTCGCTGCCGTGGATGCCGACAGCGACACGCATGATCATG 16619 Query 95026 TCCTGAGGGCGCTC 95039 | ||| || | ||| Sbjct 16620 TGCTGTGGTCTCTC 16633 Score = 93.3 bits (102), Expect = 8e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||||||| ||| || |||||||||| |||| ||||| ||||| | ||| |||| ||| Sbjct 15992 GCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGCAAG 16051 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATT 94493 ||||||||||||||| |||||||| || | ||| || Sbjct 16052 GCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTT 16087 >seq244 Length=20637 Score = 102 bits (112), Expect = 2e-16 Identities = 175/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || |||||||||| || || ||| |||||||| ||||||||| Sbjct 754 CCGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTATCGTAAATACCC 813 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || ||||| ||||| | | | | | |||||||||||| | || || | | || Sbjct 814 TCGATGCTGTCATCCTTCATGTCGATAAGGAAGCACGATGCGAGCTGTGCCTGGGGAGTA 873 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || | || || |||||||| || || || || || | | ||||| | || Sbjct 874 CCCGCGCTGAAAAGCGTGGGGGAGGCGTGTGTGAAGTATTTGTTGGACATATAGTTGTAG 933 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || |||||| ||| | |||||| ||||| ||||||||||| |||||||| |||||| Sbjct 934 GTCTCAATGGCAGCCTCGATGTCGCTGCCGTGGATGCCGACAGCGACACGCATGATCATG 993 Query 95026 TCCTGAGGGCGCTC 95039 | ||| || | ||| Sbjct 994 TGCTGTGGTCTCTC 1007 Score = 93.3 bits (102), Expect = 8e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||||||| ||| || |||||||||| |||| ||||| ||||| | ||| |||| ||| Sbjct 366 GCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGCAAG 425 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATT 94493 ||||||||||||||| |||||||| || | ||| || Sbjct 426 GCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTT 461 >seq251 Length=65300 Score = 93.3 bits (102), Expect = 8e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||||||| ||| || |||||||||| |||| ||||| ||||| | ||| |||| ||| Sbjct 64935 GCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGCAAG 64876 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATT 94493 ||||||||||||||| |||||||| || | ||| || Sbjct 64875 GCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTT 64840 Score = 84.2 bits (92), Expect = 4e-11 Identities = 171/254 (67%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || |||||||||| || || ||| ||||| || ||||||||| Sbjct 64547 CCGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAAATACCC 64488 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || ||||| ||||| | | | | | ||||||||||| | || || | | || Sbjct 64487 TCGATGCTGTCATCCTTCATGTCGATGAGGAAGCACGATGCGAGCTGTGCCTGGGGAGTA 64428 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || | || || ||||| || || || || || || | | ||||| | || Sbjct 64427 CCCGCGCTGAAAAGCGTGGGAGAGGCGTGTGTGAAGTATTTGTTGGACATATAGTTGTAG 64368 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || || ||| ||| | |||||| ||||| ||||||||||| |||||||| |||||| Sbjct 64367 GTCTCGATGGCAGCCTCGATGTCGTTGCCGTGGATGCCGACAGCGACACGCATGATCATG 64308 Query 95026 TCCTGAGGGCGCTC 95039 | ||| || | ||| Sbjct 64307 TGCTGTGGTCTCTC 64294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571840795845