Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq767 131 2e-25 seq710 131 2e-25 seq244 131 2e-25 >seq767 Length=59936 Score = 131 bits (144), Expect = 2e-25 Identities = 469/721 (65%), Gaps = 12/721 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 |||||||| || || | |||| | | | | ||| || || | ||| ||||| | | | Sbjct 59113 TCGAACTCCTCGCCGTAGACATCGGCAAGGCCAGGGCACTCGTGCGGGCACATGAGAGTC 59172 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63307 || | |||| | | ||| || ||||| || || || |||||||| ||||| || ||| Sbjct 59173 CAGTTGCCGTTCTGTTCCACACGCTTCATGAACAGGTCGGGAATCCACAGAGCGTAGAAA 59232 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | | ||||| || || ||||| ||| |||||||| | || Sbjct 59233 -AGGTCGCGAGCGCGGATCTCCTCCTTACCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAT 59291 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 ||| || | ||||| || || | ||| ||||| | | | ||||| || ||||| || || Sbjct 59292 AATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCAGGACGCTTGTTGCCACC 59351 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | || | |||||||| || || || | | ||| |||| | |||||| || Sbjct 59352 CTGGTCGACATAGCGGGCGGTGTTGTTGTAGACACGGAGCATAGGAACGAGACCGTTGGA 59411 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGAC 63546 | | || ||||| || || || || |||| ||||| | | || | |||| Sbjct 59412 TGTGCCGTTGGTGCCACCAATGTAAGAGCCGGTGGCGCGAATGCGG-TGAGTGTTGAGAC 59470 Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606 | || || || || | || ||||| | ||||| || | || || || || || | Sbjct 59471 CGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTATCGTAAATACCCT 59530 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-GAGTAGTT 63665 | ||||| ||||| |||||| | || || || | | || || | | | ||| Sbjct 59531 CGATGCTGTCATCCTTCATGTCGATAAGGAAGCACGATGCGAGCTG-TGCCTGGGGAGTA 59589 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG-TAGATTGTA 63724 ||||| | || | || || || ||||| || || |||| | || | ||| ||||| Sbjct 59590 CCCGCGCTGAAAAGCGTGGGGGAGGCGTGTGTGAAGTATTTGTTGGACATATAG-TTGTA 59648 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63784 |||||||| || | || || || | || || || || ||||||||||| | ||| Sbjct 59649 GGTCTCAATGGCAGCCTCGATGTCGCTGCCGTGGATGCCGACAGCGACACGCATGATCAT 59708 Query 63785 GTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63844 |||||| ||||| || | | ||| || || | | ||| || |||| ||| Sbjct 59709 GTGCTGTGGTCTCTCGGCGACCTTGCCGTCAATGCGGAGGAGGTATGAGCGCTCCAGAGT 59768 Query 63845 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || || || || | ||| ||||| || || ||||| | ||| |||| || ||| Sbjct 59769 CTTGAAGCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACAATGGCCGAGTTCAGC 59826 Query 63903 T 63903 | Sbjct 59827 T 59827 >seq710 Length=16846 Score = 131 bits (144), Expect = 2e-25 Identities = 469/721 (65%), Gaps = 12/721 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 |||||||| || || | |||| | | | | ||| || || | ||| ||||| | | | Sbjct 16023 TCGAACTCCTCGCCGTAGACATCGGCAAGGCCAGGGCACTCGTGCGGGCACATGAGAGTC 16082 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63307 || | |||| | | ||| || ||||| || || || |||||||| ||||| || ||| Sbjct 16083 CAGTTGCCGTTCTGTTCCACACGCTTCATGAACAGGTCGGGAATCCACAGAGCGTAGAAA 16142 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | | ||||| || || ||||| ||| |||||||| | || Sbjct 16143 -AGGTCGCGAGCGCGGATCTCCTCCTTACCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAT 16201 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 ||| || | ||||| || || | ||| ||||| | | | ||||| || ||||| || || Sbjct 16202 AATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCAGGACGCTTGTTGCCACC 16261 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | || | |||||||| || || || | | ||| |||| | |||||| || Sbjct 16262 CTGGTCGACATAGCGGGCGGTGTTGTTGTAGACACGGAGCATAGGAACGAGACCGTTGGA 16321 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGAC 63546 | | || ||||| || || || || |||| ||||| | | || | |||| Sbjct 16322 TGTGCCGTTGGTGCCACCAATGTAAGAGCCGGTGGCGCGAATGCGG-TGAGTGTTGAGAC 16380 Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606 | || || || || | || ||||| | ||||| || | || || || || || | Sbjct 16381 CGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTATCGTAAATACCCT 16440 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-GAGTAGTT 63665 | ||||| ||||| |||||| | || || || | | || || | | | ||| Sbjct 16441 CGATGCTGTCATCCTTCATGTCGATAAGGAAGCACGATGCGAGCTG-TGCCTGGGGAGTA 16499 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG-TAGATTGTA 63724 ||||| | || | || || || ||||| || || |||| | || | ||| ||||| Sbjct 16500 CCCGCGCTGAAAAGCGTGGGGGAGGCGTGTGTGAAGTATTTGTTGGACATATAG-TTGTA 16558 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63784 |||||||| || | || || || | || || || || ||||||||||| | ||| Sbjct 16559 GGTCTCAATGGCAGCCTCGATGTCGCTGCCGTGGATGCCGACAGCGACACGCATGATCAT 16618 Query 63785 GTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63844 |||||| ||||| || | | ||| || || | | ||| || |||| ||| Sbjct 16619 GTGCTGTGGTCTCTCGGCGACCTTGCCGTCAATGCGGAGGAGGTATGAGCGCTCCAGAGT 16678 Query 63845 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || || || || | ||| ||||| || || ||||| | ||| |||| || ||| Sbjct 16679 CTTGAAGCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACAATGGCCGAGTTCAGC 16736 Query 63903 T 63903 | Sbjct 16737 T 16737 >seq244 Length=20637 Score = 131 bits (144), Expect = 2e-25 Identities = 469/721 (65%), Gaps = 12/721 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 |||||||| || || | |||| | | | | ||| || || | ||| ||||| | | | Sbjct 397 TCGAACTCCTCGCCGTAGACATCGGCAAGGCCAGGGCACTCGTGCGGGCACATGAGAGTC 456 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63307 || | |||| | | ||| || ||||| || || || |||||||| ||||| || ||| Sbjct 457 CAGTTGCCGTTCTGTTCCACACGCTTCATGAACAGGTCGGGAATCCACAGAGCGTAGAAA 516 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | | ||||| || || ||||| ||| |||||||| | || Sbjct 517 -AGGTCGCGAGCGCGGATCTCCTCCTTACCGTGGTTCTTGCGAAGGTCGAGGAAGGGGAT 575 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 ||| || | ||||| || || | ||| ||||| | | | ||||| || ||||| || || Sbjct 576 AATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAAGCACCAGGACGCTTGTTGCCACC 635 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | || | |||||||| || || || | | ||| |||| | |||||| || Sbjct 636 CTGGTCGACATAGCGGGCGGTGTTGTTGTAGACACGGAGCATAGGAACGAGACCGTTGGA 695 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGAC 63546 | | || ||||| || || || || |||| ||||| | | || | |||| Sbjct 696 TGTGCCGTTGGTGCCACCAATGTAAGAGCCGGTGGCGCGAATGCGG-TGAGTGTTGAGAC 754 Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606 | || || || || | || ||||| | ||||| || | || || || || || | Sbjct 755 CGATACCACCGGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGAGTATCGTAAATACCCT 814 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-GAGTAGTT 63665 | ||||| ||||| |||||| | || || || | | || || | | | ||| Sbjct 815 CGATGCTGTCATCCTTCATGTCGATAAGGAAGCACGATGCGAGCTG-TGCCTGGGGAGTA 873 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG-TAGATTGTA 63724 ||||| | || | || || || ||||| || || |||| | || | ||| ||||| Sbjct 874 CCCGCGCTGAAAAGCGTGGGGGAGGCGTGTGTGAAGTATTTGTTGGACATATAG-TTGTA 932 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63784 |||||||| || | || || || | || || || || ||||||||||| | ||| Sbjct 933 GGTCTCAATGGCAGCCTCGATGTCGCTGCCGTGGATGCCGACAGCGACACGCATGATCAT 992 Query 63785 GTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63844 |||||| ||||| || | | ||| || || | | ||| || |||| ||| Sbjct 993 GTGCTGTGGTCTCTCGGCGACCTTGCCGTCAATGCGGAGGAGGTATGAGCGCTCCAGAGT 1052 Query 63845 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || || || || | ||| ||||| || || ||||| | ||| |||| || ||| Sbjct 1053 CTTGAAGCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACAATGGCCGAGTTCAGC 1110 Query 63903 T 63903 | Sbjct 1111 T 1111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629810050061520