Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq581 107 2e-18 >seq581 Length=38060 Score = 107 bits (118), Expect = 2e-18 Identities = 168/236 (71%), Gaps = 7/236 (3%) Strand=Plus/Minus Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||| ||||| || | ||| ||||||||||| ||||| | ||| ||||||||| Sbjct 28468 ACGTAGAACTGCGCGAACATGTGGCAAGGAGGGAGGGCCATTTTCTTGAGATCCGCGGGG 28409 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCACCA 21228 ||||| |||| | || ||| || || |||| ||| | ||| ||| | | ||||| Sbjct 28408 TTCCAGGCGCTGAGAATGATTCGGCGGTCGTAAGGGTTCTCCT-TTAGCTTG-CGCACCA 28351 Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288 | | ||||||||| || |||||||| ||||| |||| | || ||| || | Sbjct 28350 CTTCTGCCAGCTGGTCGACACCCTGACCGGTGTAGTCTGCGTTGCGGTCCTGGTATTCGG 28291 Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGG 21341 | ||||| |||| ||||||||| ||||| || || || || |||| |||||||| Sbjct 28290 CGCCAAAGTGTCGCCACTGGAAACCGTAGACGGGGCCGAGGTCGCCTTCCTCGCGG 28235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771000234320