Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq207 105 7e-18
seq720 98.7 1e-15
seq737 91.5 1e-13
>seq207
Length=38899
Score = 105 bits (116), Expect = 7e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614
||| | ||||| |||||||| ||||||||||| || ||| | |||| || ||
Sbjct 282 AACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 223
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
|||||| |||||||| |||||| ||| ||||| || || || ||||| || |||||
Sbjct 222 GAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 163
Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
||| || || | | || | ||||||| | ||| ||||||| || | |||||
Sbjct 162 GATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| || | || || ||||| |||||||||
Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCATA 72
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|||||||| || | ||||| || ||||| | || ||||| || || ||||| || ||
Sbjct 530 TGGCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCC 471
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| |||| ||| |||||||| |||||||| |||| || || ||||| || ||
Sbjct 470 GACAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGC 411
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713
|| || || || ||||| ||| | || | || | | || | ||||| | | ||
Sbjct 410 GGGATACCCTCCTTGTCT-TGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTC 352
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||||||||| | ||||| ||||| |||||||||
Sbjct 351 AACTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCATA 300
>seq720
Length=35757
Score = 98.7 bits (108), Expect = 1e-15
Identities = 346/534 (65%), Gaps = 11/534 (2%)
Strand=Plus/Minus
Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591
||||||| | ||||| |||| || | || || |||| ||| ||||| || |||||
Sbjct 30996 TCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGATGGA 30937
Query 52592 TCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTG 52651
|| | || || |||| ||||| |||||| |||| ||||| || || |||
Sbjct 30936 TCAGCGATGAGAAGTCCACCTTTGCTTGCCGTCTGATCGCCTTTGCCGCTGTTGAGGGTA 30877
Query 52652 TGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCC 52710
| || || || || || || | || || | | || || | ||| | | ||| ||
Sbjct 30876 TCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTC-TCATGGCC 30818
Query 52711 GGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCG 52770
||||| || || ||||||| | || || || ||||| || |||||||| || || ||
Sbjct 30817 GGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCT 30758
Query 52771 TGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAGA---C 52827
|| || | | | | || | ||| | || | | | | || | || |
Sbjct 30757 TGCCTGC--TCTTCTCCCAGC--TCAAGCACAA--GCCCGCTCCCAGCCTTGTCGAGAGC 30704
Query 52828 ATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCA 52887
|| | | ||||||||| | || || | ||||| | || ||||| | ||| |
Sbjct 30703 ATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGTGCG 30644
Query 52888 TTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG 52947
|| | ||||||||||| ||| | |||||| ||||||||||||| || || ||| | |||
Sbjct 30643 CTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 30584
Query 52948 TTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAAC 53007
| | || || | | || | ||| || || |||||||| || ||| |
Sbjct 30583 CTCGTCGCCCTTGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 30524
Query 53008 AACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
||||| || |||| ||||| || ||||| ||||||| ||||| || || |||
Sbjct 30523 AACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 30470
>seq737
Length=90910
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/225 (69%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
|| |||||| | || || | ||||| | || ||||| | ||| | || | |||
Sbjct 88998 GAAGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGCGCCCTGCTCGGC 89057
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||||| ||| | |||||| ||||||||||||| || || ||| | ||| | |
Sbjct 89058 ATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCC 89117
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
||||| | | || | ||| || || |||||||| || ||| | ||||| ||
Sbjct 89118 CTCGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCC 89177
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|||| ||||| || ||||| ||||||| ||||| || || |||
Sbjct 89178 CTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 89222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496058053432800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |