Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq207 105 7e-18 seq720 98.7 1e-15 seq737 91.5 1e-13 >seq207 Length=38899 Score = 105 bits (116), Expect = 7e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| | ||||| |||||||| ||||||||||| || ||| | |||| || || Sbjct 282 AACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 223 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 |||||| |||||||| |||||| ||| ||||| || || || ||||| || ||||| Sbjct 222 GAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 163 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | || | ||||||| | ||| ||||||| || | ||||| Sbjct 162 GATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| || | || || ||||| ||||||||| Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCATA 72 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | ||||| || ||||| | || ||||| || || ||||| || || Sbjct 530 TGGCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCC 471 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| ||| |||||||| |||||||| |||| || || ||||| || || Sbjct 470 GACAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGC 411 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713 || || || || ||||| ||| | || | || | | || | ||||| | | || Sbjct 410 GGGATACCCTCCTTGTCT-TGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTC 352 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | || | ||||||||||| | ||||| ||||| ||||||||| Sbjct 351 AACTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCATA 300 >seq720 Length=35757 Score = 98.7 bits (108), Expect = 1e-15 Identities = 346/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Minus Query 52532 TCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGA 52591 ||||||| | ||||| |||| || | || || |||| ||| ||||| || ||||| Sbjct 30996 TCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGATGGA 30937 Query 52592 TCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTG 52651 || | || || |||| ||||| |||||| |||| ||||| || || ||| Sbjct 30936 TCAGCGATGAGAAGTCCACCTTTGCTTGCCGTCTGATCGCCTTTGCCGCTGTTGAGGGTA 30877 Query 52652 TGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCC 52710 | || || || || || || | || || | | || || | ||| | | ||| || Sbjct 30876 TCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTC-TCATGGCC 30818 Query 52711 GGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCG 52770 ||||| || || ||||||| | || || || ||||| || |||||||| || || || Sbjct 30817 GGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCT 30758 Query 52771 TGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAGA---C 52827 || || | | | | || | ||| | || | | | | || | || | Sbjct 30757 TGCCTGC--TCTTCTCCCAGC--TCAAGCACAA--GCCCGCTCCCAGCCTTGTCGAGAGC 30704 Query 52828 ATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCA 52887 || | | ||||||||| | || || | ||||| | || ||||| | ||| | Sbjct 30703 ATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGTGCG 30644 Query 52888 TTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG 52947 || | ||||||||||| ||| | |||||| ||||||||||||| || || ||| | ||| Sbjct 30643 CTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 30584 Query 52948 TTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAAC 53007 | | || || | | || | ||| || || |||||||| || ||| | Sbjct 30583 CTCGTCGCCCTTGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 30524 Query 53008 AACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||||| || |||| ||||| || ||||| ||||||| ||||| || || ||| Sbjct 30523 AACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 30470 >seq737 Length=90910 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 || |||||| | || || | ||||| | || ||||| | ||| | || | ||| Sbjct 88998 GAAGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGCGCCCTGCTCGGC 89057 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| ||| | |||||| ||||||||||||| || || ||| | ||| | | Sbjct 89058 ATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCC 89117 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | | || | ||| || || |||||||| || ||| | ||||| || Sbjct 89118 CTCGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCC 89177 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 |||| ||||| || ||||| ||||||| ||||| || || ||| Sbjct 89178 CTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 89222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496058053432800