Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq767 86.0 8e-12 >seq767 Length=59936 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/292 (67%), Gaps = 5/292 (2%) Strand=Plus/Plus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||| | ||| | || ||||| ||||| | ||| ||||||| || || || |||||||| Sbjct 57948 TTCTTGGTCGACGGTGAACTGGATGGGTGCGGAGGCGGCTTGGGTGCGGAGGTAGTACAT 58007 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907 ||| || || |||||||| |||| ||| || ||||| || | ||| | | Sbjct 58008 GCCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGT 58067 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 ||| || ||||| || || | ||||| || |||||||| || || | ||| || Sbjct 58068 AGGCTCTTGCATGTGGATGTTGAGAGACTGGGACTGGTCGATGAATGCACCACGGTCAGC 58127 Query 70968 AGCCATTTTTATGATC-GTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 |||||||| | |||| | | | | | || ||||||| ||| || || | ||| | Sbjct 58128 AGCCATTTGGACGATCTGGCGCTGGCTG-ATCTCCCAAACAGTCTTGTAGAGAGCCTTGA 58186 Query 71027 TATCTTCTGGAAGGTTTGT-AT--TCTGAATGGATCCACCATCTGCAATAAT 71075 | || || || | ||| || || ||| ||||| ||||| || || || || Sbjct 58187 TGTCGTCGGGGATGTTGGTGATGCGCTGGATGGAACCACCGTCGGCGATGAT 58238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131154718840