Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq886 113 1e-19
seq720 87.8 4e-12
>seq886
Length=122240
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||||||||| || ||||| || ||||| | ||||||||| || || || |||
Sbjct 45625 GTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCA 45566
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| || || || || || || || || ||||| ||||| | ||
Sbjct 45565 GCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 45506
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || || ||||| || || || ||||| ||||| || ||
Sbjct 45505 ACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTC 45446
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 45445 TTGACGAAGATTTGCAT 45429
Score = 84.2 bits (92), Expect = 5e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || || || || || || | ||||| || ||||| || || || ||
Sbjct 45391 TCCTTCTGGATGTTGTAATCGGAGAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 45332
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATT 104487
|| || | ||| || || ||||| || || || || ||||| ||||| ||| || |||||
Sbjct 45331 ATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATT 45273
Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| | ||| ||| | || ||||| || || ||||||||||| ||
Sbjct 45272 GTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTACCGGT 45225
>seq720
Length=35757
Score = 87.8 bits (96), Expect = 4e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200
|| ||||||||||| || ||||| ||||| || || || || ||| | ||||| ||||||
Sbjct 30898 GCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTG 30839
Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260
||||| | || || ||| | || | || ||||| ||||| | || | | |||||
Sbjct 30838 AAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 30779
Query 269261 GGTTTACACTGCGACTTCGCTTG 269283
|| | ||| ||||||||||||
Sbjct 30778 GGCATGCACACCGACTTCGCTTG 30756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151384252551972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |