Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq207 84.2 2e-11
>seq207
Length=38899
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
||||| || |||||||||||||||||| || | | | || || | ||||| |||||
Sbjct 275 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGC-CATCCTCGAGCTG 217
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| || | || ||||||||||| || ||| | | ||||||||| || ||
Sbjct 216 CTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 157
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || || || |||| |||||| ||| | || ||||| || ||
Sbjct 156 GGACTTGACGTTGTCG--ATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCA 99
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || || |||||
Sbjct 98 GTGAGGGTCTTGACGAAGATTTGCAT 73
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || || || || |||||| || |||||||| || | || || |||||||
Sbjct 510 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCCTC 451
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||||| || | || | |||||||| || ||| | || ||||||||
Sbjct 450 GAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTG 391
Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694
||| || ||||| | | || ||||| || | || || |||| ||| |||||
Sbjct 390 AATCTTGGACTTGACGTTGTCG--ATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTC 333
Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||||||||| || || || |||||
Sbjct 332 TTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421246276494959
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |