Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq207 84.2 2e-11 >seq207 Length=38899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| || |||||||||||||||||| || | | | || || | ||||| ||||| Sbjct 275 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGC-CATCCTCGAGCTG 217 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || | || ||||||||||| || ||| | | ||||||||| || || Sbjct 216 CTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 157 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || || || |||| |||||| ||| | || ||||| || || Sbjct 156 GGACTTGACGTTGTCG--ATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCA 99 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || || ||||| Sbjct 98 GTGAGGGTCTTGACGAAGATTTGCAT 73 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || || |||||| || |||||||| || | || || ||||||| Sbjct 510 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCCTC 451 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| || | || | |||||||| || ||| | || |||||||| Sbjct 450 GAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTG 391 Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| || ||||| | | || ||||| || | || || |||| ||| ||||| Sbjct 390 AATCTTGGACTTGACGTTGTCG--ATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTC 333 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || |||||||||||||| || || || ||||| Sbjct 332 TTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246276494959