Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq207 95.1 1e-14 seq886 93.3 4e-14 >seq207 Length=38899 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| ||| || ||||| || | ||| || || || ||| Sbjct 515 CGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCG 456 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| | | ||||| || || || ||||| || ||| Sbjct 455 TCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTG 396 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || | ||||||| | ||| ||||| | || || || | |||||| Sbjct 395 TCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTGATG 336 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || |||||||| || ||||| ||||| Sbjct 335 GTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq886 Length=122240 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || || ||||| || | ||| || || | || || || Sbjct 45871 CGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCG--AGAGCGTGCGAC 45814 Query 94853 --TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||| ||||| || || | ||||| | | ||||| || || || ||||| || | Sbjct 45813 CGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCT 45754 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || | ||||||| | ||| ||||| | | || || || | |||| Sbjct 45753 TGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGA 45694 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| || || ||||| || || ||||| ||||| Sbjct 45693 TGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285826109240