Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq304 122 6e-23 seq222 104 2e-17 >seq304 Length=18447 Score = 122 bits (134), Expect = 6e-23 Identities = 210/305 (69%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 6182 TCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGA 6241 |||| | ||| ||| || |||||||| ||||| ||| | ||| ||||| | || Sbjct 9487 TCGTGACGTGAAGGATGCCTTCTACCGTTACAAGATGGAGAAGATCCAGTCCAAGATTGA 9428 Query 6242 GGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCT 6301 ||| ||||| ||||| || || ||||||||||||||| | | | ||||| | ||| Sbjct 9427 GGGCAAGGGCAACGGCATCAAGACCGTCATTGTCAACCTCCACAACGTCGCCGACCAGCT 9368 Query 6302 CGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCA 6361 | ||||| | | ||| | || || ||||| | |||||||| |||||||| | Sbjct 9367 GGCCCGCCCGCCGAACTATGTCATCAAGTACTTCGGTTTTGAACTTGGTGCTCAGACCAA 9308 Query 6362 GTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCA 6421 | || | ||| |||| |||| ||||| ||||| | || | || |||||||||| Sbjct 9307 CATCGACCCCAAGGACGACCGCTGGATCGTCAACGGCGCCCACGAGGCTTCCAAGCTGCA 9248 Query 6422 GGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGA 6481 |||| || ||||| || || |||||| || || ||| | ||| | ||||| || Sbjct 9247 GGACCACCTCGACGGTTTCATCAACAAGTTCGTTCTCTGTGGCTCTTGCAAGAACCCCGA 9188 Query 6482 GACCG 6486 ||||| Sbjct 9187 GACCG 9183 >seq222 Length=38987 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| ||| | ||||||||||||||||||||||| | |||||||| Sbjct 33313 AAGCCCGTTCCCTTCGCTATAGTTTCGCTAGATAGTAGATAGGGATAGTAGGAATCTCGT 33372 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| || || ||||||||||||||||| |||| Sbjct 33373 TAATCTATTTATACGCGTCACTAATTAGATAACGA 33407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943285199929