Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq304 122 6e-23
seq222 104 2e-17
>seq304
Length=18447
Score = 122 bits (134), Expect = 6e-23
Identities = 210/305 (69%), Gaps = 0/305 (0%)
Strand=Plus/Minus
Query 6182 TCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGA 6241
|||| | ||| ||| || |||||||| ||||| ||| | ||| ||||| | ||
Sbjct 9487 TCGTGACGTGAAGGATGCCTTCTACCGTTACAAGATGGAGAAGATCCAGTCCAAGATTGA 9428
Query 6242 GGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCT 6301
||| ||||| ||||| || || ||||||||||||||| | | | ||||| | |||
Sbjct 9427 GGGCAAGGGCAACGGCATCAAGACCGTCATTGTCAACCTCCACAACGTCGCCGACCAGCT 9368
Query 6302 CGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCA 6361
| ||||| | | ||| | || || ||||| | |||||||| |||||||| |
Sbjct 9367 GGCCCGCCCGCCGAACTATGTCATCAAGTACTTCGGTTTTGAACTTGGTGCTCAGACCAA 9308
Query 6362 GTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCA 6421
| || | ||| |||| |||| ||||| ||||| | || | || ||||||||||
Sbjct 9307 CATCGACCCCAAGGACGACCGCTGGATCGTCAACGGCGCCCACGAGGCTTCCAAGCTGCA 9248
Query 6422 GGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGA 6481
|||| || ||||| || || |||||| || || ||| | ||| | ||||| ||
Sbjct 9247 GGACCACCTCGACGGTTTCATCAACAAGTTCGTTCTCTGTGGCTCTTGCAAGAACCCCGA 9188
Query 6482 GACCG 6486
|||||
Sbjct 9187 GACCG 9183
>seq222
Length=38987
Score = 104 bits (114), Expect = 2e-17
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||| ||| | ||||||||||||||||||||||| | ||||||||
Sbjct 33313 AAGCCCGTTCCCTTCGCTATAGTTTCGCTAGATAGTAGATAGGGATAGTAGGAATCTCGT 33372
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||||| || || ||||||||||||||||| ||||
Sbjct 33373 TAATCTATTTATACGCGTCACTAATTAGATAACGA 33407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943285199929
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |