Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq886 107 2e-18
seq207 87.8 2e-12
>seq886
Length=122240
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | ||||| ||| |||||||| ||||||| || || ||
Sbjct 45657 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCA 45716
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | ||| | || | ||| ||||| || || || |||||||||||
Sbjct 45717 GACACCATCGACAACGTCAAGTCCAAGATTCAA-GACAAGGAGGGTATCCCACCTGACCA 45775
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || || || || || | || || | |||||| | || |||||
Sbjct 45776 GCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAA 45835
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || || || |||||
Sbjct 45836 CATCCAGAAGGAGTCCACCCTGCACTTGGTGCT 45868
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || || || ||||||| | || || ||||| ||
Sbjct 45429 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 45488
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| ||||| || || || || || |||||
Sbjct 45489 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 45548
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || || || || || | ||||| | ||||||| || ||| |||||
Sbjct 45549 CAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGTCCGACTACAAC 45608
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| |||||||| || || ||
Sbjct 45609 ATTCAGAAAGAATCGACTCTCCA 45631
>seq207
Length=38899
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || || || ||||||| | || || ||||| ||
Sbjct 73 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 132
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| ||||| || || || || || |||||
Sbjct 133 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 192
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || || || || || | || |||| |||||| | ||| |||||
Sbjct 193 CAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAAC 252
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|||||||| || || || || ||
Sbjct 253 ATTCAAAAGGAGTCTACTCTTCA 275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433322935343585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |