Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq886 98.7 8e-16 seq207 95.1 1e-14 >seq886 Length=122240 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| ||||||||||| ||| || ||| ||| |||||||| || |||||| Sbjct 45625 GTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCA 45566 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||| ||||| || || ||||| || ||||| ||||| || Sbjct 45565 GCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 45506 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| || ||||| || | || | || ||||| || || || Sbjct 45505 ACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTC 45446 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 45445 TTGACGAAGATTTGCAT 45429 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | || || || || | || || || || || |||||||| || Sbjct 45883 CCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 45824 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| || || || || ||||||||| ||||||| ||||| ||||| || || Sbjct 45823 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGG 45764 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| |||||| || | | || | |||||| | |||||| || Sbjct 45763 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACT 45704 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||||||||| ||||| || || || || ||||| Sbjct 45703 TCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 >seq207 Length=38899 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | || | ||||| || |||||||||||||| ||| Sbjct 302 ATACCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCG 243 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || ||||||||| |||| | |||||| ||||| || Sbjct 242 GAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGC 183 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||||| || ||| Sbjct 182 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCG 123 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || || || || || || ||||| Sbjct 122 ACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129489547908