Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq886 120 7e-22 seq533 118 3e-21 seq207 109 1e-18 seq959 107 5e-18 seq360 107 5e-18 seq900 86.0 1e-11 >seq886 Length=122240 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||||||||| ||||| || | || || || |||||| Sbjct 45847 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 45788 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || | |||||| || || || || || || || | || ||||| Sbjct 45787 ATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTG 45728 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| |||||||| ||||| || || ||||| |||||||||||| Sbjct 45727 TCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACG 45668 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 45667 AAGATTTGCAT 45657 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || ||||||| || ||||| |||||||| | || || || ||||| Sbjct 45620 TTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 45561 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| ||||| || ||||| ||| || || || |||||||| || | || || Sbjct 45560 GATCAAGCGCTGCTGG---TCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC 45504 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || |||| ||| || || || || || ||||| ||||| || || || ||||| Sbjct 45503 GTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTT 45444 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 45443 GACGAAGATTTGCAT 45429 >seq533 Length=64857 Score = 118 bits (130), Expect = 3e-21 Identities = 278/412 (67%), Gaps = 6/412 (1%) Strand=Plus/Plus Query 325967 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTA 326026 || ||||||||||||| | ||| ||| || |||| || || | | ||||||| | Sbjct 36527 ATGGGCGTGATGAACTCCATCAGGAAGCCAGGAAGTTTGAGCAAACTAGGGAACTGGACC 36586 Query 326027 TGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATG 326086 || | ||||| || | ||||| || |||| |||||| ||| ||||||||| Sbjct 36587 TGCAGGAAGTTGATAAGAAGACCCTTGATATGAGAGCCGTCATGATCTTGATCGGTCATG 36646 Query 326087 ATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAG 326145 ||||| | ||||||||||| |||| |||||| ||| | || | ||||| Sbjct 36647 ATCATGAGGTGACCGTAACGTAAGC-CCTTGGTGTCTGAGTAATCCTTCTTGTGCTGAAG 36705 Query 326146 GCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG-CCACGGAT 326203 || | ||| || || | ||| |||||||| |||||| | || || | | |||| Sbjct 36706 TCCCATGAACTTCTTGATGTTCTG-GATTTCTTGGTTCTTTGAAAT-CTGGTCGACGGTC 36763 Query 326204 GCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 326263 ||||||||||||||||| || || |||||||||||||| || || | ||| || | Sbjct 36764 GCATCGCGGACGTTCAAAAGCTTACCACGAAGAGGGAAGACACCGAAAAGGTCGGGATTG 36823 Query 326264 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 326323 || || | | || || | ||||| | || || || || || || ||||| ||| Sbjct 36824 ACAACTGCACGTCCAGCCAGCGCAAGGAGAGAGGCCGAGTCACCTTCAGTGAGAATCAGA 36883 Query 326324 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 326375 |||||| | | || || || || || || | ||||| ||||||||| Sbjct 36884 GTGCACTTGTAGCCGTCTTTTGTACCGGCTTTGTTGGCATCCGTGAGTTTGG 36935 >seq207 Length=38899 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || || ||||| || || ||||||| Sbjct 299 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAA 240 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| || || || | || || || |||||||||| |||||| || ||||| Sbjct 239 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGG---TCTGGC 183 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || || |||||||| || | || ||||| || |||| ||| || || Sbjct 182 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCG 123 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || ||||||||||| || ||||| Sbjct 122 ACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 >seq959 Length=197118 Score = 107 bits (118), Expect = 5e-18 Identities = 136/183 (74%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| ||||| || | || || || ||||||||| Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 |||||||| || |||||| || || || || |||||||| || ||| ||||| || Sbjct 41013 AGACGCTGCTG---GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATT 40958 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || ||||| ||||| ||||| || ||||| ||||| || Sbjct 40957 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 40898 Query 288462 GAA 288464 ||| Sbjct 40897 GAA 40895 >seq360 Length=83424 Score = 107 bits (118), Expect = 5e-18 Identities = 136/183 (74%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| ||||| || | || || || ||||||||| Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 |||||||| || |||||| || || || || |||||||| || ||| ||||| || Sbjct 158 AGACGCTGCTG---GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATT 103 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || ||||| ||||| ||||| || ||||| ||||| || Sbjct 102 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 43 Query 288462 GAA 288464 ||| Sbjct 42 GAA 40 >seq900 Length=35157 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| || | ||||| || || ||||| || ||||||| | Sbjct 26516 CCACCACGGAGACGAAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 26457 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTG 288356 || ||||| ||||| || | || || || ||||||||||| ||||| || Sbjct 26456 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG 26407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179639905365202