Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq886 120 7e-22
seq533 118 3e-21
seq207 109 1e-18
seq959 107 5e-18
seq360 107 5e-18
seq900 86.0 1e-11
>seq886
Length=122240
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||||||||| ||||| || | || || || ||||||
Sbjct 45847 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 45788
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || ||||| || | |||||| || || || || || || || | || |||||
Sbjct 45787 ATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTG 45728
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| |||||||| ||||| || || ||||| ||||||||||||
Sbjct 45727 TCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACG 45668
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 45667 AAGATTTGCAT 45657
Score = 114 bits (126), Expect = 3e-20
Identities = 143/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||| || || || ||||||| || ||||| |||||||| | || || || |||||
Sbjct 45620 TTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 45561
Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| ||||| || ||||| ||| || || || |||||||| || | || ||
Sbjct 45560 GATCAAGCGCTGCTGG---TCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC 45504
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || |||| ||| || || || || || ||||| ||||| || || || |||||
Sbjct 45503 GTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTT 45444
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 45443 GACGAAGATTTGCAT 45429
>seq533
Length=64857
Score = 118 bits (130), Expect = 3e-21
Identities = 278/412 (67%), Gaps = 6/412 (1%)
Strand=Plus/Plus
Query 325967 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTA 326026
|| ||||||||||||| | ||| ||| || |||| || || | | ||||||| |
Sbjct 36527 ATGGGCGTGATGAACTCCATCAGGAAGCCAGGAAGTTTGAGCAAACTAGGGAACTGGACC 36586
Query 326027 TGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATG 326086
|| | ||||| || | ||||| || |||| |||||| ||| |||||||||
Sbjct 36587 TGCAGGAAGTTGATAAGAAGACCCTTGATATGAGAGCCGTCATGATCTTGATCGGTCATG 36646
Query 326087 ATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAG 326145
||||| | ||||||||||| |||| |||||| ||| | || | |||||
Sbjct 36647 ATCATGAGGTGACCGTAACGTAAGC-CCTTGGTGTCTGAGTAATCCTTCTTGTGCTGAAG 36705
Query 326146 GCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG-CCACGGAT 326203
|| | ||| || || | ||| |||||||| |||||| | || || | | ||||
Sbjct 36706 TCCCATGAACTTCTTGATGTTCTG-GATTTCTTGGTTCTTTGAAAT-CTGGTCGACGGTC 36763
Query 326204 GCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 326263
||||||||||||||||| || || |||||||||||||| || || | ||| || |
Sbjct 36764 GCATCGCGGACGTTCAAAAGCTTACCACGAAGAGGGAAGACACCGAAAAGGTCGGGATTG 36823
Query 326264 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 326323
|| || | | || || | ||||| | || || || || || || ||||| |||
Sbjct 36824 ACAACTGCACGTCCAGCCAGCGCAAGGAGAGAGGCCGAGTCACCTTCAGTGAGAATCAGA 36883
Query 326324 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 326375
|||||| | | || || || || || || | ||||| |||||||||
Sbjct 36884 GTGCACTTGTAGCCGTCTTTTGTACCGGCTTTGTTGGCATCCGTGAGTTTGG 36935
>seq207
Length=38899
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| || || ||||| || || |||||||
Sbjct 299 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAA 240
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| ||||| || || || | || || || |||||||||| |||||| || |||||
Sbjct 239 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGG---TCTGGC 183
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| || || || |||||||| || | || ||||| || |||| ||| || ||
Sbjct 182 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCG 123
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || || || ||||||||||| || |||||
Sbjct 122 ACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73
>seq959
Length=197118
Score = 107 bits (118), Expect = 5e-18
Identities = 136/183 (74%), Gaps = 8/183 (4%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| ||||| || | || || || |||||||||
Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401
|||||||| || |||||| || || || || |||||||| || ||| ||||| ||
Sbjct 41013 AGACGCTGCTG---GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATT 40958
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || || || || ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 40957 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 40898
Query 288462 GAA 288464
|||
Sbjct 40897 GAA 40895
>seq360
Length=83424
Score = 107 bits (118), Expect = 5e-18
Identities = 136/183 (74%), Gaps = 8/183 (4%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| ||||| || | || || || |||||||||
Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401
|||||||| || |||||| || || || || |||||||| || ||| ||||| ||
Sbjct 158 AGACGCTGCTG---GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATT 103
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || || || || ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 102 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 43
Query 288462 GAA 288464
|||
Sbjct 42 GAA 40
>seq900
Length=35157
Score = 86.0 bits (94), Expect = 1e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| ||||| || | ||||| || || ||||| || ||||||| |
Sbjct 26516 CCACCACGGAGACGAAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 26457
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTG 288356
|| ||||| ||||| || | || || || ||||||||||| ||||| ||
Sbjct 26456 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG 26407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179639905365202
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |