Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq737 140 7e-28 seq720 134 3e-26 seq533 113 1e-19 >seq737 Length=90910 Score = 140 bits (154), Expect = 7e-28 Identities = 369/556 (66%), Gaps = 17/556 (3%) Strand=Plus/Plus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||| |||||||||| ||||| || | | ||| ||||| | ||||||| | | Sbjct 88692 CTCTTCAACGCCATCGACAACATCCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGG 88751 Query 243268 TGGCT-AGAACCCGGT---AAATCA---TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGT 243320 ||| | || || | || || |||||| ||||| |||||| | || Sbjct 88752 TGGATCAG----CGATGAGAAGTCGACCTTTGCTTGCCGTCTGATCGCCTTCGCCGCTGT 88807 Query 243321 TGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGT 243380 ||| ||||| | || ||||| ||| | ||||||| ||| || ||| ||| | Sbjct 88808 TGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCT 88867 Query 243381 GATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACA 243440 ||| ||||||| | || |||||| ||||| ||| ||||||||| | ||| | Sbjct 88868 CATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACCGA 88927 Query 243441 GTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACG--GTCAAA 243498 |||| || | | || ||||| || |||||| || || | | ||| | Sbjct 88928 CTTCGCCTGCCTGCTCTTCTCCCAGCTCAAGCACAAGC--CCGCTCCCAGCCTTGTCGAG 88985 Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558 |||||||| ||||| || | | ||| |||| ||| | ||||| |||| ||| Sbjct 88986 AGCATCATCACCGAAGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGC 89045 Query 243559 CGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618 || | ||||||||| | |||||| | ||||||||||| ||||| ||||||||| Sbjct 89046 GCCCTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGC 89105 Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATG 243678 | || |||| || || | || | |||||| ||| |||||||| | ||| ||| Sbjct 89106 CTGCTCGTCGCCCTCGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 89165 Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA- 243737 ||| ||| || || ||| || || ||||||||||| ||||||||| |||| || || Sbjct 89166 GAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 89225 Query 243738 ACGCCCTGGTGTGATG 243753 | | || ||||| ||| Sbjct 89226 AAGGCC-GGTGTCATG 89240 >seq720 Length=35757 Score = 134 bits (148), Expect = 3e-26 Identities = 368/556 (66%), Gaps = 17/556 (3%) Strand=Plus/Minus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||| |||||||||| |||||||| | | ||| ||||| | ||||||| | Sbjct 31000 CTCTTCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGA 30941 Query 243268 TGGCT-AGAACCCGGT---AAATCA---TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGT 243320 ||| | || || | || || |||||| ||||| |||||| | || Sbjct 30940 TGGATCAG----CGATGAGAAGTCCACCTTTGCTTGCCGTCTGATCGCCTTTGCCGCTGT 30885 Query 243321 TGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGT 243380 ||| ||||| | || ||||| ||| | ||||||| ||| || ||| ||| | Sbjct 30884 TGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCT 30825 Query 243381 GATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACA 243440 ||| | ||||| | || |||||| ||||| || ||||||||| | ||| | Sbjct 30824 CATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGA 30765 Query 243441 GTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACG--GTCAAA 243498 |||| | || | | || ||||| || |||||| || || | | ||| | Sbjct 30764 CTTCGCTTGCCTGCTCTTCTCCCAGCTCAAGCACAAGC--CCGCTCCCAGCCTTGTCGAG 30707 Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558 |||||||| || || || | | ||| |||| ||| | ||||| |||| || Sbjct 30706 AGCATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGT 30647 Query 243559 CGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618 ||| | ||||||||| | |||||| | ||||||||||| ||||| ||||||||| Sbjct 30646 GCGCTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGC 30587 Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATG 243678 | || |||| ||||| | || | |||||| ||| |||||||| | ||| ||| Sbjct 30586 CTGCTCGTCGCCCTTGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 30527 Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA- 243737 ||| ||| || || ||| || || ||||||||||| ||||||||| |||| || || Sbjct 30526 GAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 30467 Query 243738 ACGCCCTGGTGTGATG 243753 | | || ||||| ||| Sbjct 30466 AAGGCC-GGTGTCATG 30452 >seq533 Length=64857 Score = 113 bits (124), Expect = 1e-19 Identities = 277/412 (67%), Gaps = 6/412 (1%) Strand=Plus/Plus Query 298088 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTA 298147 || ||||||||||||| | ||| ||| || |||| || || | | ||||||| | Sbjct 36527 ATGGGCGTGATGAACTCCATCAGGAAGCCAGGAAGTTTGAGCAAACTAGGGAACTGGACC 36586 Query 298148 TGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATG 298207 || | ||||| || | ||||| || |||| |||||| ||| ||||||||| Sbjct 36587 TGCAGGAAGTTGATAAGAAGACCCTTGATATGAGAGCCGTCATGATCTTGATCGGTCATG 36646 Query 298208 ATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAG 298266 ||||| | ||||||||||| |||| |||||| ||| | || | ||||| Sbjct 36647 ATCATGAGGTGACCGTAACGTAAGC-CCTTGGTGTCTGAGTAATCCTTCTTGTGCTGAAG 36705 Query 298267 GCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG-CCACGGAT 298324 || | ||| || || | ||| |||||||| |||||| | || || | | |||| Sbjct 36706 TCCCATGAACTTCTTGATGTTCTG-GATTTCTTGGTTCTTTGAAAT-CTGGTCGACGGTC 36763 Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 ||||||||||| ||||| || || |||||||||||||| || || | ||| || | Sbjct 36764 GCATCGCGGACGTTCAAAAGCTTACCACGAAGAGGGAAGACACCGAAAAGGTCGGGATTG 36823 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 || || | | || || | ||||| | || || || || || || ||||| ||| Sbjct 36824 ACAACTGCACGTCCAGCCAGCGCAAGGAGAGAGGCCGAGTCACCTTCAGTGAGAATCAGA 36883 Query 298445 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 298496 |||||| | | || || || || || || | ||||| ||||||||| Sbjct 36884 GTGCACTTGTAGCCGTCTTTTGTACCGGCTTTGTTGGCATCCGTGAGTTTGG 36935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102866448706650