Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq737 140 7e-28
seq720 134 3e-26
seq533 113 1e-19
>seq737
Length=90910
Score = 140 bits (154), Expect = 7e-28
Identities = 369/556 (66%), Gaps = 17/556 (3%)
Strand=Plus/Plus
Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267
|| ||| |||||||||| ||||| || | | ||| ||||| | ||||||| | |
Sbjct 88692 CTCTTCAACGCCATCGACAACATCCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGG 88751
Query 243268 TGGCT-AGAACCCGGT---AAATCA---TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGT 243320
||| | || || | || || |||||| ||||| |||||| | ||
Sbjct 88752 TGGATCAG----CGATGAGAAGTCGACCTTTGCTTGCCGTCTGATCGCCTTCGCCGCTGT 88807
Query 243321 TGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGT 243380
||| ||||| | || ||||| ||| | ||||||| ||| || ||| ||| |
Sbjct 88808 TGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCT 88867
Query 243381 GATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACA 243440
||| ||||||| | || |||||| ||||| ||| ||||||||| | ||| |
Sbjct 88868 CATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACCGA 88927
Query 243441 GTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACG--GTCAAA 243498
|||| || | | || ||||| || |||||| || || | | ||| |
Sbjct 88928 CTTCGCCTGCCTGCTCTTCTCCCAGCTCAAGCACAAGC--CCGCTCCCAGCCTTGTCGAG 88985
Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558
|||||||| ||||| || | | ||| |||| ||| | ||||| |||| |||
Sbjct 88986 AGCATCATCACCGAAGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGC 89045
Query 243559 CGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618
|| | ||||||||| | |||||| | ||||||||||| ||||| |||||||||
Sbjct 89046 GCCCTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGC 89105
Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATG 243678
| || |||| || || | || | |||||| ||| |||||||| | ||| |||
Sbjct 89106 CTGCTCGTCGCCCTCGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 89165
Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA- 243737
||| ||| || || ||| || || ||||||||||| ||||||||| |||| || ||
Sbjct 89166 GAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 89225
Query 243738 ACGCCCTGGTGTGATG 243753
| | || ||||| |||
Sbjct 89226 AAGGCC-GGTGTCATG 89240
>seq720
Length=35757
Score = 134 bits (148), Expect = 3e-26
Identities = 368/556 (66%), Gaps = 17/556 (3%)
Strand=Plus/Minus
Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267
|| ||| |||||||||| |||||||| | | ||| ||||| | ||||||| |
Sbjct 31000 CTCTTCAACGCCATCGACAACATTCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGA 30941
Query 243268 TGGCT-AGAACCCGGT---AAATCA---TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGT 243320
||| | || || | || || |||||| ||||| |||||| | ||
Sbjct 30940 TGGATCAG----CGATGAGAAGTCCACCTTTGCTTGCCGTCTGATCGCCTTTGCCGCTGT 30885
Query 243321 TGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGT 243380
||| ||||| | || ||||| ||| | ||||||| ||| || ||| ||| |
Sbjct 30884 TGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCT 30825
Query 243381 GATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACA 243440
||| | ||||| | || |||||| ||||| || ||||||||| | ||| |
Sbjct 30824 CATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGA 30765
Query 243441 GTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACG--GTCAAA 243498
|||| | || | | || ||||| || |||||| || || | | ||| |
Sbjct 30764 CTTCGCTTGCCTGCTCTTCTCCCAGCTCAAGCACAAGC--CCGCTCCCAGCCTTGTCGAG 30707
Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558
|||||||| || || || | | ||| |||| ||| | ||||| |||| ||
Sbjct 30706 AGCATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTCCTGACTGACGCCCTTCCCTGT 30647
Query 243559 CGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618
||| | ||||||||| | |||||| | ||||||||||| ||||| |||||||||
Sbjct 30646 GCGCTGCTCGGCATGAACGCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGC 30587
Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATG 243678
| || |||| ||||| | || | |||||| ||| |||||||| | ||| |||
Sbjct 30586 CTGCTCGTCGCCCTTGGCAACACCAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 30527
Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA- 243737
||| ||| || || ||| || || ||||||||||| ||||||||| |||| || ||
Sbjct 30526 GAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 30467
Query 243738 ACGCCCTGGTGTGATG 243753
| | || ||||| |||
Sbjct 30466 AAGGCC-GGTGTCATG 30452
>seq533
Length=64857
Score = 113 bits (124), Expect = 1e-19
Identities = 277/412 (67%), Gaps = 6/412 (1%)
Strand=Plus/Plus
Query 298088 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGCTA 298147
|| ||||||||||||| | ||| ||| || |||| || || | | ||||||| |
Sbjct 36527 ATGGGCGTGATGAACTCCATCAGGAAGCCAGGAAGTTTGAGCAAACTAGGGAACTGGACC 36586
Query 298148 TGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATG 298207
|| | ||||| || | ||||| || |||| |||||| ||| |||||||||
Sbjct 36587 TGCAGGAAGTTGATAAGAAGACCCTTGATATGAGAGCCGTCATGATCTTGATCGGTCATG 36646
Query 298208 ATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAG 298266
||||| | ||||||||||| |||| |||||| ||| | || | |||||
Sbjct 36647 ATCATGAGGTGACCGTAACGTAAGC-CCTTGGTGTCTGAGTAATCCTTCTTGTGCTGAAG 36705
Query 298267 GCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG-CCACGGAT 298324
|| | ||| || || | ||| |||||||| |||||| | || || | | ||||
Sbjct 36706 TCCCATGAACTTCTTGATGTTCTG-GATTTCTTGGTTCTTTGAAAT-CTGGTCGACGGTC 36763
Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384
||||||||||| ||||| || || |||||||||||||| || || | ||| || |
Sbjct 36764 GCATCGCGGACGTTCAAAAGCTTACCACGAAGAGGGAAGACACCGAAAAGGTCGGGATTG 36823
Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444
|| || | | || || | ||||| | || || || || || || ||||| |||
Sbjct 36824 ACAACTGCACGTCCAGCCAGCGCAAGGAGAGAGGCCGAGTCACCTTCAGTGAGAATCAGA 36883
Query 298445 GTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGG 298496
|||||| | | || || || || || || | ||||| |||||||||
Sbjct 36884 GTGCACTTGTAGCCGTCTTTTGTACCGGCTTTGTTGGCATCCGTGAGTTTGG 36935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102866448706650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |