Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq737 138 1e-27
seq720 138 1e-27
seq207 104 2e-17
seq886 98.7 1e-15
>seq737
Length=90910
Score = 138 bits (152), Expect = 1e-27
Identities = 296/438 (68%), Gaps = 17/438 (4%)
Strand=Plus/Plus
Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466
||||||||| || ||||| | || || |||||| ||| ||| ||||||| | |
Sbjct 88794 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTG 88853
Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526
|| | | || | ||| | |||||||| ||| ||||||| | || || || |||||
Sbjct 88854 AAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 88913
Query 52527 GGACTGCACACGGACTTTGCGTGCCT---CTACTACAAG---ACGCGCGTGACCGAAAAA 52580
|| ||||||| ||||| || ||||| || || | || | || | | |||
Sbjct 88914 GGCATGCACACCGACTTCGCCTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGCTCC- 88972
Query 52581 TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640
| | | | || |||||| ||| || || || ||||| |||||||
Sbjct 88973 -------CAGCCTTG-TCGAGAGCATCATCACCGAAGCCGTCAAGATCGAGCAGGAGTTC 89024
Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTA 52699
| || | ||| || || || ||||| ||||||||||| || | ||||||| ||||
Sbjct 89025 CTGACTGACGCCCTTCCCTGCGCCCTGCTCGGCATGAACGC-CACCCTCATGTGCCAGTA 89083
Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC 52759
||||||||| || || || || ||| | || ||||| | | |||| || ||||||
Sbjct 89084 CATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCTACAACGC 89143
Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819
||| || || || || ||| | ||||| || || | |||||||||||||| |||||
Sbjct 89144 CACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGA 89203
Query 52820 GAAGCGAGTCGGCGAGTA 52837
|||||| ||||| || ||
Sbjct 89204 GAAGCGTGTCGGTGACTA 89221
>seq720
Length=35757
Score = 138 bits (152), Expect = 1e-27
Identities = 296/438 (68%), Gaps = 17/438 (4%)
Strand=Plus/Minus
Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466
||||| ||| || ||||| | || || |||||| ||| ||| ||||||| | |
Sbjct 30898 GCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTG 30839
Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526
|| | | || | ||| |||||||||| ||| ||||||| | || || || |||||
Sbjct 30838 AAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 30779
Query 52527 GGACTGCACACGGACTTTGCGTGCCT---CTACTACAAG---ACGCGCGTGACCGAAAAA 52580
|| ||||||| ||||| || ||||| || || | || | || | | |||
Sbjct 30778 GGCATGCACACCGACTTCGCTTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGCTCC- 30720
Query 52581 TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640
| | | | || |||||| ||| ||||| || ||||| |||||||
Sbjct 30719 -------CAGCCTTG-TCGAGAGCATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTC 30668
Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTA 52699
| || | ||| || || | |||||| ||||||||||| || | ||||||| ||||
Sbjct 30667 CTGACTGACGCCCTTCCCTGTGCGCTGCTCGGCATGAACGC-CACCCTCATGTGCCAGTA 30609
Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC 52759
||||||||| || || || || ||| | || || || | | |||| || ||||||
Sbjct 30608 CATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTTGGCAACACCAAGTTCTACAACGC 30549
Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819
||| || || || || ||| | ||||| || || | |||||||||||||| |||||
Sbjct 30548 CACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGA 30489
Query 52820 GAAGCGAGTCGGCGAGTA 52837
|||||| ||||| || ||
Sbjct 30488 GAAGCGTGTCGGTGACTA 30471
>seq207
Length=38899
Score = 104 bits (114), Expect = 2e-17
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| |||| ||||| || || || | | |||||||| || |||||||||||
Sbjct 528 GCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 469
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || || ||||||||| || ||||| | |||| || ||||| ||||| || ||
Sbjct 468 CAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGG 409
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| | || | || | ||| || | |||||| | ||| ||
Sbjct 408 GATACCCTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGACGATTCA 351
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| |||| || | || || || || |||||||| || || || |||||
Sbjct 350 ACTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||||||||||||| | ||| || |||||||| || ||||| |
Sbjct 266 GACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCG 207
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | |||||| ||||| || || || || || ||||| ||| || || |
Sbjct 206 AAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 147
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| ||||| ||||| | || | || || ||||| || || ||
Sbjct 146 TTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 87
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 86 ACGAAGATTTGCAT 73
>seq886
Length=122240
Score = 98.7 bits (108), Expect = 1e-15
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| |||| ||||| || || || | | | |||||||| || |||||||||||
Sbjct 45884 GCCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 45825
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || ||||||||| || ||||| | |||| || ||||| ||||| || ||
Sbjct 45824 GAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGG 45765
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| ||| | || | || | ||| || | |||||| | || ||
Sbjct 45764 GATACCCTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGAGGATTCA 45707
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| |||| || | ||||| || || ||||| || || || || |||||
Sbjct 45706 ACTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||| ||| | ||||| |||||||||||| || |||| |
Sbjct 45392 CTCCTTCTGGATGTTGTAATCGGAGAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCGAA 45333
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
||| |||||||| ||||| ||||| || || || ||||| ||| || || | |||
Sbjct 45332 GATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATT 45273
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590
|| | | |||||||| ||||||||||| | || | || ||||| ||
Sbjct 45272 GT-CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTACCGGT 45225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256451054480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |