Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq737 138 1e-27 seq720 138 1e-27 seq207 104 2e-17 seq886 98.7 1e-15 >seq737 Length=90910 Score = 138 bits (152), Expect = 1e-27 Identities = 296/438 (68%), Gaps = 17/438 (4%) Strand=Plus/Plus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||||||| || ||||| | || || |||||| ||| ||| ||||||| | | Sbjct 88794 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTG 88853 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | ||| | |||||||| ||| ||||||| | || || || ||||| Sbjct 88854 AAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 88913 Query 52527 GGACTGCACACGGACTTTGCGTGCCT---CTACTACAAG---ACGCGCGTGACCGAAAAA 52580 || ||||||| ||||| || ||||| || || | || | || | | ||| Sbjct 88914 GGCATGCACACCGACTTCGCCTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGCTCC- 88972 Query 52581 TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640 | | | | || |||||| ||| || || || ||||| ||||||| Sbjct 88973 -------CAGCCTTG-TCGAGAGCATCATCACCGAAGCCGTCAAGATCGAGCAGGAGTTC 89024 Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTA 52699 | || | ||| || || || ||||| ||||||||||| || | ||||||| |||| Sbjct 89025 CTGACTGACGCCCTTCCCTGCGCCCTGCTCGGCATGAACGC-CACCCTCATGTGCCAGTA 89083 Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC 52759 ||||||||| || || || || ||| | || ||||| | | |||| || |||||| Sbjct 89084 CATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCTACAACGC 89143 Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819 ||| || || || || ||| | ||||| || || | |||||||||||||| ||||| Sbjct 89144 CACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGA 89203 Query 52820 GAAGCGAGTCGGCGAGTA 52837 |||||| ||||| || || Sbjct 89204 GAAGCGTGTCGGTGACTA 89221 >seq720 Length=35757 Score = 138 bits (152), Expect = 1e-27 Identities = 296/438 (68%), Gaps = 17/438 (4%) Strand=Plus/Minus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||| ||| || ||||| | || || |||||| ||| ||| ||||||| | | Sbjct 30898 GCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGTTG 30839 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | ||| |||||||||| ||| ||||||| | || || || ||||| Sbjct 30838 AAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 30779 Query 52527 GGACTGCACACGGACTTTGCGTGCCT---CTACTACAAG---ACGCGCGTGACCGAAAAA 52580 || ||||||| ||||| || ||||| || || | || | || | | ||| Sbjct 30778 GGCATGCACACCGACTTCGCTTGCCTGCTCTTCTCCCAGCTCAAGCACAAGCCCGCTCC- 30720 Query 52581 TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640 | | | | || |||||| ||| ||||| || ||||| ||||||| Sbjct 30719 -------CAGCCTTG-TCGAGAGCATCATCACCGAGGCCGTCAAGATCGAGCAGGAGTTC 30668 Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTA 52699 | || | ||| || || | |||||| ||||||||||| || | ||||||| |||| Sbjct 30667 CTGACTGACGCCCTTCCCTGTGCGCTGCTCGGCATGAACGC-CACCCTCATGTGCCAGTA 30609 Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC 52759 ||||||||| || || || || ||| | || || || | | |||| || |||||| Sbjct 30608 CATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTTGGCAACACCAAGTTCTACAACGC 30549 Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819 ||| || || || || ||| | ||||| || || | |||||||||||||| ||||| Sbjct 30548 CACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTTCGA 30489 Query 52820 GAAGCGAGTCGGCGAGTA 52837 |||||| ||||| || || Sbjct 30488 GAAGCGTGTCGGTGACTA 30471 >seq207 Length=38899 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||||| || || || | | |||||||| || ||||||||||| Sbjct 528 GCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 469 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||||||| || ||||| | |||| || ||||| ||||| || || Sbjct 468 CAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGG 409 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | |||||| | ||| || Sbjct 408 GATACCCTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGACGATTCA 351 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||| || | || || || || |||||||| || || || ||||| Sbjct 350 ACTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||||||||||||| | ||| || |||||||| || ||||| | Sbjct 266 GACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCG 207 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | |||||| ||||| || || || || || ||||| ||| || || | Sbjct 206 AAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 147 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||| ||||| | || | || || ||||| || || || Sbjct 146 TTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 87 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 86 ACGAAGATTTGCAT 73 >seq886 Length=122240 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||||| || || || | | | |||||||| || ||||||||||| Sbjct 45884 GCCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 45825 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||||||| || ||||| | |||| || ||||| ||||| || || Sbjct 45824 GAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGG 45765 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | |||||| | || || Sbjct 45764 GATACCCTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGAGGATTCA 45707 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || |||| || | ||||| || || ||||| || || || || ||||| Sbjct 45706 ACTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||| ||| | ||||| |||||||||||| || |||| | Sbjct 45392 CTCCTTCTGGATGTTGTAATCGGAGAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCGAA 45333 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| |||||||| ||||| ||||| || || || ||||| ||| || || | ||| Sbjct 45332 GATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATT 45273 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || | | |||||||| ||||||||||| | || | || ||||| || Sbjct 45272 GT-CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTACCGGT 45225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256451054480