Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq737 136 4e-27 seq720 127 2e-24 seq207 120 3e-22 seq886 116 4e-21 seq959 84.2 2e-11 seq360 84.2 2e-11 >seq737 Length=90910 Score = 136 bits (150), Expect = 4e-27 Identities = 298/443 (67%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198 ||| ||||||| |||||| || ||||| |||||||||| ||| ||| || | || Sbjct 88785 CGTCTGATCGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATC 88844 Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258 || | |||| | || | ||| | ||||| || || ||||||||| ||||| Sbjct 88845 TTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCT 88904 Query 47259 AGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAA 47318 | ||||| ||| |||||||| |||| ||||| || || | | || || | || Sbjct 88905 CGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTCTTCTCCC--AGC-TCAAGCAC 88961 Query 47319 AAGTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATG 47375 ||| || |||| | | ||| ||| | ||||||||||| || ||| | Sbjct 88962 AAGCC---CGCTCCCAGCCTTGTCGAGAGCATCATCACCGAAGCCGTCAAGATCGAGCAG 89018 Query 47376 GAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGA 47435 ||||| | | || || || ||| | | | || |||||||| | ||| | Sbjct 89019 GAGTTCCTGACTGACGCCCTTCCCTGCGCCCTGCTCGGCATGAACGCCACCCTCATGTGC 89078 Query 47436 AAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTAC 47495 |||||||||| || |||||||||||||||||||| || | ||||| | ||| Sbjct 89079 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCTAC 89138 Query 47496 CACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTT 47555 || || || || ||||| || ||| | ||||| || |||| |||||||||||||| Sbjct 89139 AACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTC 89198 Query 47556 TTCGAGAAGCGCGTCGGCGAATA 47578 ||||||||||| ||||| || || Sbjct 89199 TTCGAGAAGCGTGTCGGTGACTA 89221 >seq720 Length=35757 Score = 127 bits (140), Expect = 2e-24 Identities = 298/447 (67%), Gaps = 17/447 (4%) Strand=Plus/Minus Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198 ||| ||||||| || ||| || ||||| |||||||||| ||| ||| || | || Sbjct 30907 CGTCTGATCGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATC 30848 Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258 || | |||| | || | ||| ||||||| || || ||||||||| ||||| Sbjct 30847 TTCTGGTTGAAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCC 30788 Query 47259 AGAGACGAAGGCCTGCACACCAACTT----TGCCTGTCTCTACTACAACACTAGAGTCGA 47314 | ||||| ||| |||||||| |||| |||||| |||| || | | || | Sbjct 30787 CGTGACGAGGGCATGCACACCGACTTCGCTTGCCTG-CTCTTCTCCCAGC------TCAA 30735 Query 47315 TCAAAAGTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGA 47371 || ||| || |||| | | ||| ||| | |||| |||||| || || Sbjct 30734 GCACAAGCC---CGCTCCCAGCCTTGTCGAGAGCATCATCACCGAGGCCGTCAAGATCGA 30678 Query 47372 GATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGAT 47431 | |||||| | | || || || ||| | | | || |||||||| | || Sbjct 30677 GCAGGAGTTCCTGACTGACGCCCTTCCCTGTGCGCTGCTCGGCATGAACGCCACCCTCAT 30618 Query 47432 GAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGAT 47491 | | |||||||||| || |||||||||||||||||||| || | ||||| | Sbjct 30617 GTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTTGGCAACACCAAGTT 30558 Query 47492 TTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAA 47551 ||| || || || || ||||| || ||| | ||||| || |||| ||||||||||| Sbjct 30557 CTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAA 30498 Query 47552 CTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||| ||||||||||| ||||| || || Sbjct 30497 CTTCTTCGAGAAGCGTGTCGGTGACTA 30471 >seq207 Length=38899 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| |||||||| ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 269 GTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 210 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 209 GCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 150 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | |||||| || | || | || ||||| || || || Sbjct 149 ACGTTG-TCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 91 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 90 CTTGACGAAGATTTGCAT 73 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || ||||| || || || ||||| || || ||||||| Sbjct 515 CGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCG 456 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| || || || || ||||||||| Sbjct 455 TCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTG 396 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || || || ||||| |||| |||| |||||| | || ||||||| || | Sbjct 395 TCTTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGACGATTCAACTTCGAGTGTGAT 337 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| |||||||| || || || ||||| Sbjct 336 GGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq886 Length=122240 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| ||||| ||||| ||| || |||||| || || ||||| || ||| Sbjct 45625 GTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCA 45566 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 45565 GCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 45506 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | |||||| || | || | || ||||| || || || Sbjct 45505 ACGTTG-TCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 45447 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 45446 CTTGACGAAGATTTGCAT 45429 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || ||||| || || || ||||| || | ||||||| Sbjct 45871 CGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCG 45812 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| || || || || ||||||||| Sbjct 45811 TCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTG 45752 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || || || ||||| ||||| ||| |||||| | || ||||||| || | Sbjct 45751 TCTTGAATCTTGGACTTGACGTTGT-CGATGGTGTCTGAGGATTCAACTTCGAGTGTGAT 45693 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||||| ||||| || || || || ||||| Sbjct 45692 GGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 >seq959 Length=197118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| || || ||||| || || ||| ||||| Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||||||| ||| || ||| | | ||| Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 40954 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| |||| ||| | || ||||| ||||| || || || || Sbjct 40953 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40895 >seq360 Length=83424 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| || || ||||| || || ||| ||||| Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||||||| ||| || ||| | | ||| Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 99 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| |||| ||| | || ||||| ||||| || || || || Sbjct 98 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495099934160