Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq737 136 4e-27
seq720 127 2e-24
seq207 120 3e-22
seq886 116 4e-21
seq959 84.2 2e-11
seq360 84.2 2e-11
>seq737
Length=90910
Score = 136 bits (150), Expect = 4e-27
Identities = 298/443 (67%), Gaps = 9/443 (2%)
Strand=Plus/Plus
Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198
||| ||||||| |||||| || ||||| |||||||||| ||| ||| || | ||
Sbjct 88785 CGTCTGATCGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATC 88844
Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258
|| | |||| | || | ||| | ||||| || || ||||||||| |||||
Sbjct 88845 TTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCT 88904
Query 47259 AGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAA 47318
| ||||| ||| |||||||| |||| ||||| || || | | || || | ||
Sbjct 88905 CGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTCTTCTCCC--AGC-TCAAGCAC 88961
Query 47319 AAGTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATG 47375
||| || |||| | | ||| ||| | ||||||||||| || ||| |
Sbjct 88962 AAGCC---CGCTCCCAGCCTTGTCGAGAGCATCATCACCGAAGCCGTCAAGATCGAGCAG 89018
Query 47376 GAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGA 47435
||||| | | || || || ||| | | | || |||||||| | ||| |
Sbjct 89019 GAGTTCCTGACTGACGCCCTTCCCTGCGCCCTGCTCGGCATGAACGCCACCCTCATGTGC 89078
Query 47436 AAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTAC 47495
|||||||||| || |||||||||||||||||||| || | ||||| | |||
Sbjct 89079 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCTAC 89138
Query 47496 CACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTT 47555
|| || || || ||||| || ||| | ||||| || |||| ||||||||||||||
Sbjct 89139 AACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTC 89198
Query 47556 TTCGAGAAGCGCGTCGGCGAATA 47578
||||||||||| ||||| || ||
Sbjct 89199 TTCGAGAAGCGTGTCGGTGACTA 89221
>seq720
Length=35757
Score = 127 bits (140), Expect = 2e-24
Identities = 298/447 (67%), Gaps = 17/447 (4%)
Strand=Plus/Minus
Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198
||| ||||||| || ||| || ||||| |||||||||| ||| ||| || | ||
Sbjct 30907 CGTCTGATCGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATC 30848
Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258
|| | |||| | || | ||| ||||||| || || ||||||||| |||||
Sbjct 30847 TTCTGGTTGAAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAACGAGCTCATCTCC 30788
Query 47259 AGAGACGAAGGCCTGCACACCAACTT----TGCCTGTCTCTACTACAACACTAGAGTCGA 47314
| ||||| ||| |||||||| |||| |||||| |||| || | | || |
Sbjct 30787 CGTGACGAGGGCATGCACACCGACTTCGCTTGCCTG-CTCTTCTCCCAGC------TCAA 30735
Query 47315 TCAAAAGTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGA 47371
|| ||| || |||| | | ||| ||| | |||| |||||| || ||
Sbjct 30734 GCACAAGCC---CGCTCCCAGCCTTGTCGAGAGCATCATCACCGAGGCCGTCAAGATCGA 30678
Query 47372 GATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGAT 47431
| |||||| | | || || || ||| | | | || |||||||| | ||
Sbjct 30677 GCAGGAGTTCCTGACTGACGCCCTTCCCTGTGCGCTGCTCGGCATGAACGCCACCCTCAT 30618
Query 47432 GAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGAT 47491
| | |||||||||| || |||||||||||||||||||| || | ||||| |
Sbjct 30617 GTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTTGGCAACACCAAGTT 30558
Query 47492 TTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAA 47551
||| || || || || ||||| || ||| | ||||| || |||| |||||||||||
Sbjct 30557 CTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAA 30498
Query 47552 CTTTTTCGAGAAGCGCGTCGGCGAATA 47578
||| ||||||||||| ||||| || ||
Sbjct 30497 CTTCTTCGAGAAGCGTGTCGGTGACTA 30471
>seq207
Length=38899
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| |||||||| ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 269 GTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 210
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||| |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 209 GCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 150
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| ||||| | | |||||| || | || | || ||||| || || ||
Sbjct 149 ACGTTG-TCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 91
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || || || |||||
Sbjct 90 CTTGACGAAGATTTGCAT 73
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||||| || | || ||||| || || || ||||| || || |||||||
Sbjct 515 CGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCG 456
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| |||| | |||||||| || || || || |||||||||
Sbjct 455 TCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTG 396
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|| || || ||||| |||| |||| |||||| | || ||||||| || |
Sbjct 395 TCTTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGACGATTCAACTTCGAGTGTGAT 337
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||||||| |||||||| || || || |||||
Sbjct 336 GGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301
>seq886
Length=122240
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||| ||||| ||||| ||| || |||||| || || ||||| || |||
Sbjct 45625 GTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCA 45566
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||| |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 45565 GCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 45506
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| ||||| | | |||||| || | || | || ||||| || || ||
Sbjct 45505 ACGTTG-TCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 45447
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || || || |||||
Sbjct 45446 CTTGACGAAGATTTGCAT 45429
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||||| || | || ||||| || || || ||||| || | |||||||
Sbjct 45871 CGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCG 45812
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| |||| | |||||||| || || || || |||||||||
Sbjct 45811 TCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTG 45752
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|| || || ||||| ||||| ||| |||||| | || ||||||| || |
Sbjct 45751 TCTTGAATCTTGGACTTGACGTTGT-CGATGGTGTCTGAGGATTCAACTTCGAGTGTGAT 45693
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||||||| ||||| || || || || |||||
Sbjct 45692 GGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657
>seq959
Length=197118
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | ||||| || || ||||| || || ||| |||||
Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || || || ||||||||||||||| ||| || ||| | | |||
Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 40954
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| |||||| | |||||| |||| ||| | || ||||| ||||| || || || ||
Sbjct 40953 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40895
>seq360
Length=83424
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | ||||| || || ||||| || || ||| |||||
Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| || || || ||||||||||||||| ||| || ||| | | |||
Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 99
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| |||||| | |||||| |||| ||| | || ||||| ||||| || || || ||
Sbjct 98 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475495099934160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |