Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq886 93.3 4e-14 seq207 87.8 2e-12 >seq886 Length=122240 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || |||||||| || | | || || || || || ||||| || || || || || ||| Sbjct 45658 ATACCTCCGCGAAGGCGGAGGACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCG 45599 Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | || || || | || || || ||| | ||||| || |||||||| | Sbjct 45598 --GACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTG 45541 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287 |||| ||||| || || || || || || |||| || | || | |||||||||||| Sbjct 45540 GCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAAGAC 45482 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || ||||| | || ||||| || || || || || || |||||||| Sbjct 45481 TCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 45429 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || | || ||| | ||||| || || ||||| ||||| || || || | Sbjct 45883 CCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 45824 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | || || | || || || ||| | || | || |||||||| || || Sbjct 45823 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGG 45764 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || |||||||| || |||| || | || | |||||| || || || || Sbjct 45763 ATACCCTCCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGGATTCAAC 45705 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || | ||||||||||| ||||| || || || |||||||| Sbjct 45704 TTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 >seq207 Length=38899 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || |||||||| || || || ||| | || ||| || Sbjct 281 ACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 222 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | ||||| || |||||||| ||||| ||||| || || || || Sbjct 221 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 162 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||||||||||||||||| || ||||| | || || Sbjct 161 ATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || || || || |||||||| Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997781611640