Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq207 141 2e-28 seq886 118 2e-21 seq959 96.9 8e-15 seq360 96.9 8e-15 >seq207 Length=38899 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| |||||||||||||| |||| ||||||||| | || || Sbjct 521 CGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTG 462 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||| ||||||||||| || || || Sbjct 461 CGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCC 402 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| |||| |||||||| | ||| || || | Sbjct 401 TCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGT 342 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || || ||||| Sbjct 341 GTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTG 304 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| ||||| ||||||||||| | ||||||||| | | ||| Sbjct 293 CGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTG 234 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| | |||||||||||| || || || Sbjct 233 CGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCC 174 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| ||||| | | || || || | Sbjct 173 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGA 114 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || ||||| Sbjct 113 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTG 76 >seq886 Length=122240 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||||||||| || || || | ||||||||| | || ||| Sbjct 45649 CGAAGGCGGAGGACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTG 45590 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| |||||||| || |||||||| | ||||||||||| || || || Sbjct 45589 CGACCGTCTTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCC 45530 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| ||||| | | || || || | Sbjct 45529 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGA 45470 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || ||||| Sbjct 45469 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTG 45432 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| || || |||||||| |||| ||||||||| | | || Sbjct 45877 CGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTG 45818 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||| ||||||||||| || || || Sbjct 45817 CGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCC 45758 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| |||| |||||||| | ||| || || | Sbjct 45757 TCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGT 45698 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || |||||||| || || || ||||| Sbjct 45697 GTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTG 45660 Score = 107 bits (118), Expect = 5e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| || || |||||| |||| |||||| || | | || Sbjct 45421 CGAAGGCGGAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTA 45362 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||| ||||||||||| |||||||||||||| ||| ||| || Sbjct 45361 CGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGAGGAATGCCC 45302 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| |||||| | | || || || | Sbjct 45301 TCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGG 45242 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| |||||||| |||| Sbjct 45241 GTGATAGTCTTACCGGTGA 45223 >seq959 Length=197118 Score = 96.9 bits (106), Expect = 8e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | || || || |||||||| |||||||||| Sbjct 41075 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 41016 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||||||||| || ||| || || ||||| ||||| |||||| | Sbjct 41015 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 40956 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| ||||| || || || || | Sbjct 40955 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 40896 Query 199620 A 199620 | Sbjct 40895 A 40895 >seq360 Length=83424 Score = 96.9 bits (106), Expect = 8e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | || || || |||||||| |||||||||| Sbjct 220 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 161 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||||||||| || ||| || || ||||| ||||| |||||| | Sbjct 160 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 101 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| ||||| || || || || | Sbjct 100 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 41 Query 199620 A 199620 | Sbjct 40 A 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178907114369253