Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq207 150 2e-31 seq886 141 1e-28 seq959 134 2e-26 seq360 134 2e-26 seq900 118 1e-21 seq160 95.1 1e-14 >seq207 Length=38899 Score = 150 bits (166), Expect = 2e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | ||| ||||||||| || ||||||||||| |||||||| | || ||| Sbjct 281 ACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 222 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| | Sbjct 221 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 162 Query 46505 ATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||||| ||| | | | |||||| || || || || | |||||||| || Sbjct 161 ATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||||||||| Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Score = 141 bits (156), Expect = 1e-28 Identities = 174/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | ||| || | | ||||| ||||| |||| || |||||| ||||| ||||| Sbjct 534 TTACTGGCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTA 475 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || || ||||| |||| ||||||||||| || ||||| || | |||||||||||| Sbjct 474 GTCCGACAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTC 415 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCG 46538 | ||| | | ||||||||| ||||| ||||| ||| | | | ||||| || Sbjct 414 AGGCGGGATACCCTCCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCTGACG 356 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || | |||||||| ||||| || || ||||| || ||||||||||| Sbjct 355 ATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq886 Length=122240 Score = 141 bits (156), Expect = 1e-28 Identities = 148/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || || ||||||||||| |||||||| |||| || |||||||| || ||||| Sbjct 45619 TCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAAG 45560 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | ||| | || |||||||||| |||||| ||||| ||| Sbjct 45559 ATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 45501 Query 46523 GCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || || | |||||||| ||||| || || || || || Sbjct 45500 GTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 45441 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 45440 GAAGATTTGCAT 45429 Score = 132 bits (146), Expect = 5e-26 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | ||| || | | ||||| ||||| |||| || |||||| ||||| ||||| Sbjct 45890 TTACTGGCCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTA 45831 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || || ||||| |||| ||||||||||| || ||||| || | |||||||||||| Sbjct 45830 GTCCGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTC 45771 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCG 46538 | || | | ||||||||| ||||| ||||| ||| | | | ||||| | Sbjct 45770 AGGTGGGATACCCTCCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCTGAGG 45712 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || | |||||||||||||| || || || || || ||||||||||| Sbjct 45711 ATTCAACTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Score = 105 bits (116), Expect = 8e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||| ||||| || || || |||| ||||| ||||||||| Sbjct 45397 GTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTACGGCCGTCCTCGAGTTGCTTGCCG 45338 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | ||||||||||| | || | || |||||||||| |||||| |||| Sbjct 45337 GCGAAGATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC 45278 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | | |||||| || ||||| || | ||||| || || || || Sbjct 45277 ACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTACCGGT 45225 >seq959 Length=197118 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| | Sbjct 41075 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 41016 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||| | || | || |||||||||| |||||| |||| | | Sbjct 41015 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 40956 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | |||||||| ||||||||||| || ||||| | Sbjct 40955 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 40896 Query 46584 AG 46585 || Sbjct 40895 AG 40894 >seq360 Length=83424 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| | Sbjct 220 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 161 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||| | || | || |||||||||| |||||| |||| | | Sbjct 160 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGT 101 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | |||||||| ||||||||||| || ||||| | Sbjct 100 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGA 41 Query 46584 AG 46585 || Sbjct 40 AG 39 >seq900 Length=35157 Score = 118 bits (130), Expect = 1e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || || | || |||||||| ||||| ||||||||||| || ||||| | Sbjct 26505 ACGAAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 26446 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||||||||||||||| |||| |||||||||||| | || | || |||||| Sbjct 26445 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTT 26386 Query 46498 GTC 46500 ||| Sbjct 26385 GTC 26383 >seq160 Length=27641 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| |||| || |||||||| |||||||| ||||| ||||||||||||||| Sbjct 9194 GTGCTCTCCTTCTGGACGTTATAGTCGGACAGAGTGCGGTCGTCCTCGAGCTGCTTGCCG 9253 Query 46457 GCGAATATCAAGCGCTGCTG 46476 ||||| |||| |||||| || Sbjct 9254 GCGAAGATCAGGCGCTGATG 9273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231624204680