Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq720 102 1e-16
seq375 96.9 4e-15
seq737 93.3 5e-14
>seq720
Length=35757
Score = 102 bits (112), Expect = 1e-16
Identities = 284/431 (66%), Gaps = 6/431 (1%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| |||||||||||||| || | ||| ||||| |||||
Sbjct 30471 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTCCATG 30530
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103
||||| || || || | ||||| | | | |||| || || ||| || |
Sbjct 30531 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTGGTGTTGCC--AAGGGCGACGAGCAGGC 30588
Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163
| || | || |||| ||||||| | |||| | |||||| |||| || ||
Sbjct 30589 GGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTGGCGTTCATGCCGAGCAGCGCAC 30648
Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223
| || || ||||| | |||| | | ||| |||| || ||||| | | |||| |
Sbjct 30649 AGGGAAGGGCGTCAGTCAGGAACTCCTGCTCGATCTTGACGGCCTCGGTGATGATGCTCT 30708
Query 117224 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCC 117282
|| | || || ||| || | | | | ||||||| || || ||
Sbjct 30709 CGACAAGGCTGGGAGCGGG-CTTGTGCTTGAGCTGGGAGAAGAGCAGGCAAGCGAAGTCG 30767
Query 117283 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGA 117342
||| | ||||| || ||||| || || || || |||||| ||||| | |||||||
Sbjct 30768 GTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGCCATGAGA 30827
Query 117343 CCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 117402
|| |||||||||||||| | || | | ||| || |||||||||||||||||||| |||
Sbjct 30828 CCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACA 30887
Query 117403 CACGCAAACGC 117413
||||| ||
Sbjct 30888 GCGGCAAAGGC 30898
>seq375
Length=101482
Score = 96.9 bits (106), Expect = 4e-15
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGA 9420
||| || | ||| ||||| ||||| ||||||| ||| || || || | ||| | |||
Sbjct 20914 CTTGCCAATGGCGTCAATTTCATCGATGAAGATAATGCAAGGCGTGCTCTTC-CTTGCGT 20972
Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480
|| | || || ||||| || ||| || || ||||| || |||||||| || || | |
Sbjct 20973 TTGCGAAAAGGTCGCGGACTCTTGAGGGACCGACACCGACGAACATCTCGACGAACTCAG 21032
Query 9481 CGGCGGAA-CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539
| ||| || || | ||| || ||| ||| || || ||| |||| ||| ||||||
Sbjct 21033 ATCCTGAAACACTGAA-GAATGGCACACCAGACTCGCCAGCAGTGGCCTTGGCCAGAAGA 21091
Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
|||||||| ||||| || ||| |||| || || || |||||||| |||||
Sbjct 21092 GTCTTACCAGTACCAGGAGGACCGCTCAGGATAGCGCCACGAGGAATCTTTGCGCC 21147
>seq737
Length=90910
Score = 93.3 bits (102), Expect = 5e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
||||| || || || || || || || |||||| ||||| | ||||||||| ||||||
Sbjct 88915 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACCACGCTTC 88856
Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 117402
|||||||| | || | | ||| || |||||||||||||||||||| |||
Sbjct 88855 TTCAACCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACA 88805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589973727605160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |