Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq720 102 1e-16 seq375 96.9 4e-15 seq737 93.3 5e-14 >seq720 Length=35757 Score = 102 bits (112), Expect = 1e-16 Identities = 284/431 (66%), Gaps = 6/431 (1%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 30471 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTCCATG 30530 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103 ||||| || || || | ||||| | | | |||| || || ||| || | Sbjct 30531 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTGGTGTTGCC--AAGGGCGACGAGCAGGC 30588 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 | || | || |||| ||||||| | |||| | |||||| |||| || || Sbjct 30589 GGTCGGCGACGAACTCGATGTACTGGCACATGAGGGTGGCGTTCATGCCGAGCAGCGCAC 30648 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 | || || ||||| | |||| | | ||| |||| || ||||| | | |||| | Sbjct 30649 AGGGAAGGGCGTCAGTCAGGAACTCCTGCTCGATCTTGACGGCCTCGGTGATGATGCTCT 30708 Query 117224 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCC 117282 || | || || ||| || | | | | ||||||| || || || Sbjct 30709 CGACAAGGCTGGGAGCGGG-CTTGTGCTTGAGCTGGGAGAAGAGCAGGCAAGCGAAGTCG 30767 Query 117283 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGA 117342 ||| | ||||| || ||||| || || || || |||||| ||||| | ||||||| Sbjct 30768 GTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGCCATGAGA 30827 Query 117343 CCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 117402 || |||||||||||||| | || | | ||| || |||||||||||||||||||| ||| Sbjct 30828 CCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACA 30887 Query 117403 CACGCAAACGC 117413 ||||| || Sbjct 30888 GCGGCAAAGGC 30898 >seq375 Length=101482 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGA 9420 ||| || | ||| ||||| ||||| ||||||| ||| || || || | ||| | ||| Sbjct 20914 CTTGCCAATGGCGTCAATTTCATCGATGAAGATAATGCAAGGCGTGCTCTTC-CTTGCGT 20972 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 || | || || ||||| || ||| || || ||||| || |||||||| || || | | Sbjct 20973 TTGCGAAAAGGTCGCGGACTCTTGAGGGACCGACACCGACGAACATCTCGACGAACTCAG 21032 Query 9481 CGGCGGAA-CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | ||| || || | ||| || ||| ||| || || ||| |||| ||| |||||| Sbjct 21033 ATCCTGAAACACTGAA-GAATGGCACACCAGACTCGCCAGCAGTGGCCTTGGCCAGAAGA 21091 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||||||| ||||| || ||| |||| || || || |||||||| ||||| Sbjct 21092 GTCTTACCAGTACCAGGAGGACCGCTCAGGATAGCGCCACGAGGAATCTTTGCGCC 21147 >seq737 Length=90910 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 ||||| || || || || || || || |||||| ||||| | ||||||||| |||||| Sbjct 88915 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACCACGCTTC 88856 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 117402 |||||||| | || | | ||| || |||||||||||||||||||| ||| Sbjct 88855 TTCAACCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACA 88805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973727605160