Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq207 163 6e-35
seq886 143 6e-29
seq959 107 4e-18
seq360 107 4e-18
seq900 89.7 1e-12
>seq207
Length=38899
Score = 163 bits (180), Expect = 6e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||||||||| ||||| |||||||| ||||| |||| |||||| | ||||| ||
Sbjct 282 AACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 223
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||||||| |||||||| | || || |||||||| || ||||| || ||||| ||
Sbjct 222 GAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 163
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| || || ||||| ||| || || ||||| || | |||||
Sbjct 162 GATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | ||||||
Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCAT 73
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || || || ||||| || | || || | || || ||||||||
Sbjct 504 GTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCCTCGAGCTG 445
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| || || || ||||| || || || || || ||||||||||| ||
Sbjct 444 CTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTT 385
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || |||||||| || ||| ||||| || || | ||||| || ||
Sbjct 384 GGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTCTTGCCGGT 325
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| |||||| ||||| | ||||||
Sbjct 324 GAGAGTTTTGACGAAGATTTGCAT 301
>seq886
Length=122240
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||| || ||||| ||||| ||||| |||| ||||| | || |||||
Sbjct 45637 ACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCA 45578
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| |||||||| | || || |||||||| || ||||| || ||||| ||
Sbjct 45577 AGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 45518
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || || ||||| ||| || || ||||| || | |||||
Sbjct 45517 ATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTG 45458
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | ||||||
Sbjct 45457 CCAGTGAGGGTCTTGACGAAGATTTGCAT 45429
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| || | || || | || || ||||||||
Sbjct 45860 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTG 45801
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| || || || ||||| || || || || || ||||||||||| ||
Sbjct 45800 CTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTT 45741
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || |||||||| || ||| ||||| || || | || || || ||
Sbjct 45740 GGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTGCCGGT 45681
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||| || ||||| | ||||||
Sbjct 45680 GAGAGTCTTGACGAAGATTTGCAT 45657
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| ||| ||| || || || |||||||||| || || | || || |||
Sbjct 45409 ACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTACGGCCGTCCTCG 45350
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || ||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct 45349 AGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGG 45290
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || |||||||| || ||||| |||||||| | |||||
Sbjct 45289 ATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTA 45230
Query 195112 CCTGT 195116
|| ||
Sbjct 45229 CCGGT 45225
>seq959
Length=197118
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || || | || || ||||||||||| || ||||||||
Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || |||||||| |||||||| || ||||| || || || ||| || || ||
Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 40954
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|||||||| || || || || ||||| | ||||| || |||| || || |||||
Sbjct 40953 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40895
>seq360
Length=83424
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || || | || || ||||||||||| || ||||||||
Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || |||||||| |||||||| || ||||| || || || ||| || || ||
Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 99
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|||||||| || || || || ||||| | ||||| || |||| || || |||||
Sbjct 98 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40
>seq900
Length=35157
Score = 89.7 bits (98), Expect = 1e-12
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || || || ||||| |||| || || | || || |||
Sbjct 26498 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 26439
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| || || || |||||||| |||||||| || ||||||
Sbjct 26438 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 26382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109467967591553
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |