Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq886 104 2e-17
seq207 91.5 1e-13
seq959 82.4 5e-11
seq360 82.4 5e-11
>seq886
Length=122240
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||| ||||| |||||||| || | || | || ||
Sbjct 45865 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCG 45806
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | ||||||||||| |
Sbjct 45805 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGA 45746
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || || ||||| |||| || ||||||||
Sbjct 45745 ATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTG 45686
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||||||||| || ||||| ||||||
Sbjct 45685 CCGGTGAGAGTCTTGACGAAGATTTGCATA 45656
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||||||||| ||||| || || | || | || || ||||| || || || ||
Sbjct 45620 TTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 45561
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| | || ||||||||| |||| | ||||||||||| ||||| ||||||
Sbjct 45560 GATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 45501
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || | ||| || || | || ||||| || || ||||| ||||| ||
Sbjct 45500 GTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 45441
Query 34970 AAAGATCTGCATA 34982
||||| ||||||
Sbjct 45440 GAAGATTTGCATA 45428
>seq207
Length=38899
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| |||||||| || | || | || ||
Sbjct 509 ACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCCTCG 450
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| |||| | ||||||||||| |
Sbjct 449 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGA 390
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | ||||| |||| || ||||| ||
Sbjct 389 ATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTCTTG 330
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| |||||||| || || ||||| ||||||
Sbjct 329 CCGGTGAGAGTTTTGACGAAGATTTGCATA 300
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| ||||| || || || |||||||| ||||| ||||| | || |||| ||
Sbjct 282 AACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 223
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||| || || || || || | || ||||||||| |||| | |||||||||||
Sbjct 222 GAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 163
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| |||||| | || | || | ||| || || | || ||||| ||
Sbjct 162 GATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| ||||| || ||||| ||||||
Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCATA 72
>seq959
Length=197118
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| || ||| | || | || || ||||| || ||||| || ||
Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || ||||||||| | || | ||||||||||| ||||| || || || |
Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCAC--AT--T 40958
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| ||| || ||| || |||| ||| ||||| || ||||| || ||||| ||
Sbjct 40957 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 40898
Query 34970 AAAG 34973
|||
Sbjct 40897 GAAG 40894
>seq360
Length=83424
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| || ||| | || | || || ||||| || ||||| || ||
Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || ||||||||| | || | ||||||||||| ||||| || || || |
Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCAC--AT--T 103
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| ||| || ||| || |||| ||| ||||| || ||||| || ||||| ||
Sbjct 102 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 43
Query 34970 AAAG 34973
|||
Sbjct 42 GAAG 39
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324629805743352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |