Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq886 104 2e-17 seq207 91.5 1e-13 seq959 82.4 5e-11 seq360 82.4 5e-11 >seq886 Length=122240 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| |||||||| || | || | || || Sbjct 45865 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCG 45806 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| | Sbjct 45805 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGA 45746 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || || ||||| |||| || |||||||| Sbjct 45745 ATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTG 45686 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||| || ||||| |||||| Sbjct 45685 CCGGTGAGAGTCTTGACGAAGATTTGCATA 45656 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| ||||| || || | || | || || ||||| || || || || Sbjct 45620 TTCTTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 45561 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || ||||||||| |||| | ||||||||||| ||||| |||||| Sbjct 45560 GATCAAGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 45501 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | ||| || || | || ||||| || || ||||| ||||| || Sbjct 45500 GTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 45441 Query 34970 AAAGATCTGCATA 34982 ||||| |||||| Sbjct 45440 GAAGATTTGCATA 45428 >seq207 Length=38899 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| |||||||| || | || | || || Sbjct 509 ACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCCTCG 450 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| |||| | ||||||||||| | Sbjct 449 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGA 390 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||||| |||| || ||||| || Sbjct 389 ATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTCTTG 330 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||| || || ||||| |||||| Sbjct 329 CCGGTGAGAGTTTTGACGAAGATTTGCATA 300 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| ||||| || || || |||||||| ||||| ||||| | || |||| || Sbjct 282 AACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 223 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || | || ||||||||| |||| | ||||||||||| Sbjct 222 GAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 163 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| | || | || | ||| || || | || ||||| || Sbjct 162 GATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTT 103 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || ||||| |||||| Sbjct 102 GCCAGTGAGGGTCTTGACGAAGATTTGCATA 72 >seq959 Length=197118 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| | || | || || ||||| || ||||| || || Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || ||||||||| | || | ||||||||||| ||||| || || || | Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCAC--AT--T 40958 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| ||| || ||| || |||| ||| ||||| || ||||| || ||||| || Sbjct 40957 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 40898 Query 34970 AAAG 34973 ||| Sbjct 40897 GAAG 40894 >seq360 Length=83424 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| | || | || || ||||| || ||||| || || Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || ||||||||| | || | ||||||||||| ||||| || || || | Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCAC--AT--T 103 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| ||| || ||| || |||| ||| ||||| || ||||| || ||||| || Sbjct 102 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAAC 43 Query 34970 AAAG 34973 ||| Sbjct 42 GAAG 39 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629805743352