Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq207 109 4e-19 seq886 87.8 1e-12 >seq207 Length=38899 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| ||||| || ||||| || ||||| |||| | ||| | | |||| || | ||| Sbjct 275 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGC 216 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || ||||||||||| || || ||||| ||||| || || || || || || Sbjct 215 TTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTG 156 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | |||||| || | || || |||||||||| || ||||| || Sbjct 155 GACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTG 96 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 95 AGGGTCTTGACGAAGATTTGCAT 73 >seq886 Length=122240 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| || || || || || ||||| || | || || | | || || Sbjct 45865 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCG 45806 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | |||||||| || || || | ||||| || || || || || || || || |||||| Sbjct 45805 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGA 45746 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| ||||| || |||| |||||| Sbjct 45745 ATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTG 45686 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481 ||||| | ||| || || || || ||||| | ||||||| Sbjct 45685 CCGGTGAGAGTCTTGACGAAGATTTGCATACCTCCGCGAAG 45645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396273768372363