Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq207 109 4e-19
seq886 87.8 1e-12
>seq207
Length=38899
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| ||||| || ||||| || ||||| |||| | ||| | | |||| || | |||
Sbjct 275 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGC 216
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || ||||||||||| || || ||||| ||||| || || || || || ||
Sbjct 215 TTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTG 156
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | |||||| || | || || |||||||||| || ||||| ||
Sbjct 155 GACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCAGTG 96
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || || |||||
Sbjct 95 AGGGTCTTGACGAAGATTTGCAT 73
>seq886
Length=122240
Score = 87.8 bits (96), Expect = 1e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || ||||| || || || || || ||||| || | || || | | || ||
Sbjct 45865 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCG 45806
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||||| || || || | ||||| || || || || || || || || ||||||
Sbjct 45805 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGA 45746
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| || | ||| ||||| || |||| ||||||
Sbjct 45745 ATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTTTTG 45686
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481
||||| | ||| || || || || ||||| | |||||||
Sbjct 45685 CCGGTGAGAGTCTTGACGAAGATTTGCATACCTCCGCGAAG 45645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396273768372363
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |