Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq894 251 9e-62 seq207 199 5e-46 seq886 178 2e-39 seq959 125 9e-24 seq360 125 9e-24 >seq894 Length=188349 Score = 251 bits (278), Expect = 9e-62 Identities = 475/698 (68%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| ||| ||||| |||||||| | || || || ||||| || || ||| | | | Sbjct 36197 ATGGCTCCCGCTATCGGTATCGACCTTGGTACCACGTACTCTTGCGTGGGTATCTTCCGT 36138 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| || | || ||||| || ||||| || ||||| || | |||| Sbjct 36137 GATGACCGCATCGAGATCATTGCCAACGACCAGGGCAACCGCACCACTCCCTCTTTCGTT 36078 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| || || | || ||||| | || || |||| || || ||| || |||||| Sbjct 36077 GCCTTCACCGACACCGAGCGTCTGATCGGTGACTCCGCCAAGAACCAGGTCGCCATGAAC 36018 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 ||| ||| || ||||| ||||| ||||| || || || |||||||| ||| | Sbjct 36017 CCTCACAACACCGTCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCCAGGACGCTGAG 35958 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 ||||| | ||| || ||| ||| | | | | || || || ||| | ||||| Sbjct 35957 GTCCAGGCCGACATGAAGCACTTCCCCTTTAAGGTCGT---CGAGAAGGCCGGCAAGCCC 35901 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | | | || || || | || |||| || | || ||||||| || || || || Sbjct 35900 GTCACCCAGGTCGAGTTCAAGGGCGAGACCAAGGACTTCACTCCCGAGGAGATCTCCTCC 35841 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| ||||| || || || | | | ||| || || || || Sbjct 35840 ATGATCCTCACCAAGATGCGCGAGACCGCTGAGTCCTACCTCGGTGGCACCGTTAACAAT 35781 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || | || || || || ||||||| || || || || ||||| || |||||||| Sbjct 35780 GCTGTCATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCC 35721 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | || || ||||| ||| ||| | || ||||| || || || || ||||| || Sbjct 35720 GGTCTGATCGCCGGTCTCAACGTTCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATC 35661 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| |||| | || || || || | ||||| ||||| ||| Sbjct 35660 GCCTACGGTCTTGACAAGAAGCAGGAGGGTGAGAAGAACGTTCTCATCTTCGATCTTGGT 35601 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || |||| || || | ||||| ||||| || ||| | Sbjct 35600 GGTGGTACCTTCGATGTTTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 35541 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || || | ||||| || || ||||| Sbjct 35540 ACTGCCGGTGACACCCACTTGGGTGGCGAGGACTTCGA 35503 >seq207 Length=38899 Score = 199 bits (220), Expect = 5e-46 Identities = 184/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| ||||| || || ||||| || ||||| |||| Sbjct 68 GTGGTATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGT 127 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||| || || ||||| ||||| || || | Sbjct 128 CTTCCGACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAG 187 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || |||||||| ||||| || ||||| || || || | || | Sbjct 188 ACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACT 247 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||||||||||||||| ||||| ||||| | ||||| |||||| Sbjct 248 ACAACATTCAAAAGGAGTCTACTCTTCACCTGGTTCTCCGCCTTCGTGGTGGT 300 Score = 176 bits (194), Expect = 6e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || ||||| || || || || || ||||| ||||| ||||| | Sbjct 296 GTGGTATGCAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAAT 355 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||||||||| ||||| ||| |||| ||||||||||||| ||||| || || || || | Sbjct 356 CGTCAGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTG 415 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || |||||||| ||||| || || || || || || | || | Sbjct 416 ACCAGCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACT 475 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| | || |||||||| ||||| ||| | || || Sbjct 476 ACAACATCCAGAAGGAGTCGACTCTGCACTTGGTGCT 512 >seq886 Length=122240 Score = 178 bits (196), Expect = 2e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| ||||| || || ||||| || ||||| |||| Sbjct 45424 GTGGTATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGT 45483 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||| || || ||||| ||||| || || | Sbjct 45484 CTTCCGACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAG 45543 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || || |||||||| ||||||||||| || || || || | || | Sbjct 45544 ACCAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGTCCGACT 45603 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| || || || ||||| ||||| || || | ||||| || ||| Sbjct 45604 ACAACATTCAGAAAGAATCGACTCTCCACCTGGTCCTCCGCCTTCGCGGAGGT 45656 Score = 174 bits (192), Expect = 2e-38 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || || || || || || ||||| ||||| ||||| ||||| || | Sbjct 45655 GTATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCT 45714 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||||| ||||| ||| |||| ||||||||||||| ||||| || || ||||| || | Sbjct 45715 CAGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACC 45774 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || || |||||||| ||||| || || || || || ||| | || |||| Sbjct 45775 AGCAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACA 45834 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || | || |||||||| || || ||| | || || Sbjct 45835 ACATCCAGAAGGAGTCCACCCTGCACTTGGTGCT 45868 Score = 143 bits (158), Expect = 4e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || ||||||||||| ||||| ||||| || ||||| ||||| || | || | Sbjct 45225 ACCGGTAAGACTATCACCCTTGAGGTGGAGTCCTCCGACACCATCGACAATGTGAAGAGC 45284 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| |||||||| || || ||||| || ||||| || || || || Sbjct 45285 AAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTTATCTTCGCCGGCAAG 45344 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || || || ||||||||| | ||||||||| | || |||||| || || ||| Sbjct 45345 CAACTCGAGGACGGCCGTACCCTCTCCGATTACAACATCCAGAAGGAGAGCACCCTTCAC 45404 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 45405 CTCGTCCTCCGCCTTCGCGGTGGT 45428 >seq959 Length=197118 Score = 125 bits (138), Expect = 9e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 40894 CTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 40953 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || | || |||||| || || ||||| |||||||| || || ||||| || || Sbjct 40954 CGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCT 41013 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || || || || |||||| | || |||||| | || || Sbjct 41014 GATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 41073 Query 172050 GG 172051 || Sbjct 41074 GG 41075 >seq360 Length=83424 Score = 125 bits (138), Expect = 9e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 39 CTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 98 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || | || |||||| || || ||||| |||||||| || || ||||| || || Sbjct 99 CGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCT 158 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || || || || |||||| | || |||||| | || || Sbjct 159 GATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 218 Query 172050 GG 172051 || Sbjct 219 GG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657854513874480