Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq304 111 1e-19 >seq304 Length=18447 Score = 111 bits (122), Expect = 1e-19 Identities = 181/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 || |||||| ||||||||| || || ||||||| | ||| | ||||||| |||| Sbjct 9215 ACGAACTTGTTGATGAAACCGTCGAGGTGGTCCTGCAGCTTGGAAGCCTCGTGGGCGCCG 9274 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||||||| | || |||| ||| |||| | || || || || || || | ||| Sbjct 9275 TTGACGATCCAGCGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCACCAAGTTCAAAACCG 9334 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| | || | | ||| || | ||| | ||||| | | | | |||| Sbjct 9335 AAGTACTTGATGACATAGTTCGGCGGGCGGGCCAGCTGGTCGGCGACGTTGTGGAGGTTG 9394 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 || ||||| |||||||||||||||||||| || || | ||||| ||| | ||| Sbjct 9395 ACAATGACGGTCTTGATGCCGTTGCCCTTGCCCTCAATCTTGGACTGGATCTTCTCCATC 9454 Query 34591 TTGTAGCGGTAGAACGCGTCC 34611 ||||| |||||||| || ||| Sbjct 9455 TTGTAACGGTAGAAGGCATCC 9475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412836774784787