Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq207 113 3e-20 seq886 107 1e-18 >seq207 Length=38899 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||||| || || || ||||||||||| || || | || ||||| | Sbjct 287 CGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCA 228 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || || ||||| | ||||| | ||||| || ||||| || ||||| ||| Sbjct 227 TCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCCCTCCTTG 168 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||| | || | |||||| ||| || || |||||||| || Sbjct 167 TCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGAGTGATG 108 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || || || || ||||| Sbjct 107 GTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || | || |||||||||||| || || || || || || || ||||| || ||| Sbjct 530 TGGCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCC 471 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | |||||| || ||||| || || ||||| | || | | ||||| || ||| Sbjct 470 GACAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGC 411 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 || |||||||| |||||||| ||| || | ||||| | || | ||||| || ||| Sbjct 410 GGGATACCCTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTC 352 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || ||||| || | ||||| || || || ||||| Sbjct 351 AACTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq886 Length=122240 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || | || |||||||||||| || || ||||| || || || ||||| || ||| Sbjct 45886 TGGCCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCC 45827 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | |||||| || ||||| || || ||||| | || | | ||||| || || Sbjct 45826 GAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGT 45767 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 || |||||||| |||||||| ||| || | ||||| | || | ||||| || ||| Sbjct 45766 GGGATACCCTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTC 45708 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || |||||||| || | || || || || || ||||| Sbjct 45707 AACTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214697630219