Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq737 105 6e-18 seq720 100 3e-16 >seq737 Length=90910 Score = 105 bits (116), Expect = 6e-18 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| || ||| |||| | |||||| || |||||||||||||| Sbjct 88557 GCTCGACGAGGTTCTCGTTGACAATGCCGTCAGAGGCAGCAAAGAAGGCGAGAACGTGGG 88498 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||||| || || | |||| | || ||||||||||| | || ||||||||||| Sbjct 88497 AAATGAAGAAGCGCTCATCGTCGGTGAGGCGCTTGTTCCAGTCGTGAAGGTCCTTGGACA 88438 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||| || | ||||| | | | | |||||||||||| ||||| |||| Sbjct 88437 GATCGATCTCCTCTGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCC--AGAT 88380 Query 110892 CT 110893 || Sbjct 88379 CT 88378 >seq720 Length=35757 Score = 100 bits (110), Expect = 3e-16 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || ||| |||| | || ||||| |||||||||||||| Sbjct 31135 GCTCGACAAGGTTCTCGTTGACAATGCCGTCAGAAGCGGCGAAGAAGGCGAGAACGTGGG 31194 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||||| || || | |||| | || ||||||||||| | || ||||||||||| Sbjct 31195 AAATGAAGAAGCGCTCATCGTCGGTGAGGCGCTTGTTCCAGTCGTGAAGGTCCTTGGACA 31254 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||||||||| || | ||||| | | | | |||||||||||| ||||| |||| Sbjct 31255 GGTCGATCTCCTCTGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCC--AGAT 31312 Query 110892 CT 110893 || Sbjct 31313 CT 31314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445089064430880