Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq737 100 9e-16 seq767 95.1 4e-14 seq710 95.1 4e-14 seq251 95.1 4e-14 seq244 95.1 4e-14 seq720 91.5 5e-13 >seq737 Length=90910 Score = 100 bits (110), Expect = 9e-16 Identities = 369/565 (65%), Gaps = 20/565 (4%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||| ||||| ||||||||| | ||| |||||| | || || Sbjct 88413 TTCTGGACCGCAGAGGAGATCGATCTGTCCAAGGACCTTCACGACTGGAACAAGCGCCTC 88472 Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATGCATCTTG---GCCTTCTTTGCACCGAGCGAC 443453 | | |||| ||| ||||||| | | | | ||||||||||| | ||| Sbjct 88473 ACCGACGATGAGCGC---TTCTTCATTTCCCACGTTCTCGCCTTCTTTGCTGCCTCTGAC 88529 Query 443454 GGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCC 443513 || || ||| ||||| || || ||| ||| | ||| | | ||||||| Sbjct 88530 GGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAGCTCTGAGGTTCAGATCCCCGAGGCT 88589 Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573 |||| |||||||| ||||| | ||||||||||| ||| ||||| |||| | Sbjct 88590 CGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTC 88649 Query 443574 TTGATCAAGACACTA-ATTCCGAACGAAGACGAACAGCGGTCCATCTTCTCATCGTTCAT 443632 | ||| | || ||| ||| ||| | ||| | || | ||||| | || ||| Sbjct 88650 CTCATCGACAC-CTACATTAGCGACGTCCGCCAACGCCAGTACCTCTTC--AACGC-CAT 88705 Query 443633 -GACCACG--CCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689 ||| || || ||||| | | ||| || |||||| | |||| || | ||| Sbjct 88706 CGACAACATCCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGGTGGATC-AGCGATG 88764 Query 443690 AAATCTC-AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748 | | || | ||| | || || |||| || || | || || || | || || Sbjct 88765 AGAAGTCGACCTTTGCTTGCCGTCTGATCGCCTTCGCCGCTGTTGAGGGTATCTTCTTCT 88824 Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808 |||| ||| |||||||||||||||||||| |||||||| || ||| || |||||| Sbjct 88825 CCGGCTCCTTC-GCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTGACC 88883 Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868 || ||||| || ||| ||| |||||||| |||| |||||||||||| || ||| Sbjct 88884 TTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTC 88943 Query 443869 TACACCAAACACATCGTGCACAAGC 443893 | | || || || |||||||| Sbjct 88944 TTCTCC---CAGCTCAAGCACAAGC 88965 >seq767 Length=59936 Score = 95.1 bits (104), Expect = 4e-14 Identities = 211/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| ||||||| | ||||||| || ||||| ||||| || || ||| ||| || Sbjct 59396 CCTATGCTCCGTGTCTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGT 59337 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || ||| |||||||||| ||||| ||||||||||||||| | || | Sbjct 59336 CCTGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 59277 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 || | | || ||| | |||||| | ||| |||||| | | | |||| | ||| Sbjct 59276 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 59217 Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220 ||| ||||| ||| || ||||||| ||| | ||||| |||||||| || Sbjct 59216 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 59157 Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280 || | || || || | ||| | || || ||||| || ||||| | || Sbjct 59156 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 59097 Query 255281 TACGAGCGTGCCGGCCG 255297 |||||||||| ||||| Sbjct 59096 TACGAGCGTGAAGGCCG 59080 Score = 89.7 bits (98), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 256125 AGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCA 256184 |||||| |||||||| ||||||||||| | | | || |||||||| || ||||| | Sbjct 58453 AGATCGCTGAGCACGGTCTGCGCAACTCTCTCCTCGTCGCTCCCATGCCTACTGCCAGTA 58394 Query 256185 CCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGC 256244 || | || ||| ||||| | || || |||| ||| || | |||| ||| ||| | Sbjct 58393 CCTCGCAGATCATGGGTTTCAACGAGTGCTTCGAGCCCTACACCAGCAACATCTACTCTC 58334 Query 256245 GCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTAC 256304 ||||||| | | | ||||||||| || || |||| | || | | ||| | || | Sbjct 58333 GCCGCGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCCTTGGCTGCTCAAGGACCTTGT-C 58275 Query 256305 GA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAAT 256344 || | |||||||||| ||| || ||| | | ||||| || Sbjct 58274 GACCGTGGTCTGTGGAGCGACAACATGAAGAACCGCATCAT 58234 >seq710 Length=16846 Score = 95.1 bits (104), Expect = 4e-14 Identities = 211/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| ||||||| | ||||||| || ||||| ||||| || || ||| ||| || Sbjct 16306 CCTATGCTCCGTGTCTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGT 16247 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || ||| |||||||||| ||||| ||||||||||||||| | || | Sbjct 16246 CCTGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 16187 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 || | | || ||| | |||||| | ||| |||||| | | | |||| | ||| Sbjct 16186 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 16127 Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220 ||| ||||| ||| || ||||||| ||| | ||||| |||||||| || Sbjct 16126 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 16067 Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280 || | || || || | ||| | || || ||||| || ||||| | || Sbjct 16066 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 16007 Query 255281 TACGAGCGTGCCGGCCG 255297 |||||||||| ||||| Sbjct 16006 TACGAGCGTGAAGGCCG 15990 >seq251 Length=65300 Score = 95.1 bits (104), Expect = 4e-14 Identities = 211/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| ||||||| | ||||||| ||||| || ||||| ||||| ||| ||| || Sbjct 64621 CCTATGCTCCGTGTCTACAACAACACCGCTCGTTATGTCGACCAAGGTGGCAACAAGCGT 64680 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || ||| ||||||| || ||||| ||||||||||||||| | || | Sbjct 64681 CCTGGTGCTTTCGCCATCTATCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 64740 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 || | | || ||| | |||||| | ||| |||||| | | | |||| | ||| Sbjct 64741 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 64800 Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220 ||| ||||| ||| || ||||||| ||| | ||||| |||||||| || Sbjct 64801 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 64860 Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280 || | || || || | ||| | || || ||||| || ||||| | || Sbjct 64861 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 64920 Query 255281 TACGAGCGTGCCGGCCG 255297 |||||||||| ||||| Sbjct 64921 TACGAGCGTGAAGGCCG 64937 >seq244 Length=20637 Score = 95.1 bits (104), Expect = 4e-14 Identities = 211/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| ||||||| | ||||||| || ||||| ||||| || || ||| ||| || Sbjct 680 CCTATGCTCCGTGTCTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGT 621 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || ||| |||||||||| ||||| ||||||||||||||| | || | Sbjct 620 CCTGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 561 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 || | | || ||| | |||||| | ||| |||||| | | | |||| | ||| Sbjct 560 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 501 Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220 ||| ||||| ||| || ||||||| ||| | ||||| |||||||| || Sbjct 500 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 441 Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280 || | || || || | ||| | || || ||||| || ||||| | || Sbjct 440 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 381 Query 255281 TACGAGCGTGCCGGCCG 255297 |||||||||| ||||| Sbjct 380 TACGAGCGTGAAGGCCG 364 >seq720 Length=35757 Score = 91.5 bits (100), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 3/136 (2%) Strand=Plus/Minus Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 || |||||||||||||||||||| |||||||| || ||| ||| |||||||| ||| Sbjct 30859 TTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAAC 30800 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAA 443877 || || ||| || |||||||| |||| ||||||||| || || |||| | || Sbjct 30799 GAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCTTGCCTGCTCTTCTCC--- 30743 Query 443878 CACATCGTGCACAAGC 443893 || || |||||||| Sbjct 30742 CAGCTCAAGCACAAGC 30727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588316483817755