Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq737 100 9e-16
seq767 95.1 4e-14
seq710 95.1 4e-14
seq251 95.1 4e-14
seq244 95.1 4e-14
seq720 91.5 5e-13
>seq737
Length=90910
Score = 100 bits (110), Expect = 9e-16
Identities = 369/565 (65%), Gaps = 20/565 (4%)
Strand=Plus/Plus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| |||||||| ||||| ||||||||| | ||| |||||| | || ||
Sbjct 88413 TTCTGGACCGCAGAGGAGATCGATCTGTCCAAGGACCTTCACGACTGGAACAAGCGCCTC 88472
Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATGCATCTTG---GCCTTCTTTGCACCGAGCGAC 443453
| | |||| ||| ||||||| | | | | ||||||||||| | |||
Sbjct 88473 ACCGACGATGAGCGC---TTCTTCATTTCCCACGTTCTCGCCTTCTTTGCTGCCTCTGAC 88529
Query 443454 GGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCC 443513
|| || ||| ||||| || || ||| ||| | ||| | | |||||||
Sbjct 88530 GGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAGCTCTGAGGTTCAGATCCCCGAGGCT 88589
Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573
|||| |||||||| ||||| | ||||||||||| ||| ||||| |||| |
Sbjct 88590 CGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTC 88649
Query 443574 TTGATCAAGACACTA-ATTCCGAACGAAGACGAACAGCGGTCCATCTTCTCATCGTTCAT 443632
| ||| | || ||| ||| ||| | ||| | || | ||||| | || |||
Sbjct 88650 CTCATCGACAC-CTACATTAGCGACGTCCGCCAACGCCAGTACCTCTTC--AACGC-CAT 88705
Query 443633 -GACCACG--CCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689
||| || || ||||| | | ||| || |||||| | |||| || | |||
Sbjct 88706 CGACAACATCCCCTGCATCCGTAAGAAGGCTGACTGGGCTCTGCGGTGGATC-AGCGATG 88764
Query 443690 AAATCTC-AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748
| | || | ||| | || || |||| || || | || || || | || ||
Sbjct 88765 AGAAGTCGACCTTTGCTTGCCGTCTGATCGCCTTCGCCGCTGTTGAGGGTATCTTCTTCT 88824
Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808
|||| ||| |||||||||||||||||||| |||||||| || ||| || ||||||
Sbjct 88825 CCGGCTCCTTC-GCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTGACC 88883
Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868
|| ||||| || ||| ||| |||||||| |||| |||||||||||| || |||
Sbjct 88884 TTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTC 88943
Query 443869 TACACCAAACACATCGTGCACAAGC 443893
| | || || || ||||||||
Sbjct 88944 TTCTCC---CAGCTCAAGCACAAGC 88965
>seq767
Length=59936
Score = 95.1 bits (104), Expect = 4e-14
Identities = 211/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| ||||||| | ||||||| || ||||| ||||| || || ||| ||| ||
Sbjct 59396 CCTATGCTCCGTGTCTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGT 59337
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| || || ||| |||||||||| ||||| ||||||||||||||| | || |
Sbjct 59336 CCTGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 59277
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
|| | | || ||| | |||||| | ||| |||||| | | | |||| | |||
Sbjct 59276 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 59217
Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220
||| ||||| ||| || ||||||| ||| | ||||| |||||||| ||
Sbjct 59216 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 59157
Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280
|| | || || || | ||| | || || ||||| || ||||| | ||
Sbjct 59156 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 59097
Query 255281 TACGAGCGTGCCGGCCG 255297
|||||||||| |||||
Sbjct 59096 TACGAGCGTGAAGGCCG 59080
Score = 89.7 bits (98), Expect = 2e-12
Identities = 154/221 (70%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 256125 AGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCA 256184
|||||| |||||||| ||||||||||| | | | || |||||||| || ||||| |
Sbjct 58453 AGATCGCTGAGCACGGTCTGCGCAACTCTCTCCTCGTCGCTCCCATGCCTACTGCCAGTA 58394
Query 256185 CCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGC 256244
|| | || ||| ||||| | || || |||| ||| || | |||| ||| ||| |
Sbjct 58393 CCTCGCAGATCATGGGTTTCAACGAGTGCTTCGAGCCCTACACCAGCAACATCTACTCTC 58334
Query 256245 GCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTAC 256304
||||||| | | | ||||||||| || || |||| | || | | ||| | || |
Sbjct 58333 GCCGCGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCCTTGGCTGCTCAAGGACCTTGT-C 58275
Query 256305 GA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAAT 256344
|| | |||||||||| ||| || ||| | | ||||| ||
Sbjct 58274 GACCGTGGTCTGTGGAGCGACAACATGAAGAACCGCATCAT 58234
>seq710
Length=16846
Score = 95.1 bits (104), Expect = 4e-14
Identities = 211/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| ||||||| | ||||||| || ||||| ||||| || || ||| ||| ||
Sbjct 16306 CCTATGCTCCGTGTCTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGT 16247
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| || || ||| |||||||||| ||||| ||||||||||||||| | || |
Sbjct 16246 CCTGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 16187
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
|| | | || ||| | |||||| | ||| |||||| | | | |||| | |||
Sbjct 16186 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 16127
Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220
||| ||||| ||| || ||||||| ||| | ||||| |||||||| ||
Sbjct 16126 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 16067
Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280
|| | || || || | ||| | || || ||||| || ||||| | ||
Sbjct 16066 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 16007
Query 255281 TACGAGCGTGCCGGCCG 255297
|||||||||| |||||
Sbjct 16006 TACGAGCGTGAAGGCCG 15990
>seq251
Length=65300
Score = 95.1 bits (104), Expect = 4e-14
Identities = 211/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| ||||||| | ||||||| ||||| || ||||| ||||| ||| ||| ||
Sbjct 64621 CCTATGCTCCGTGTCTACAACAACACCGCTCGTTATGTCGACCAAGGTGGCAACAAGCGT 64680
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| || || ||| ||||||| || ||||| ||||||||||||||| | || |
Sbjct 64681 CCTGGTGCTTTCGCCATCTATCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 64740
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
|| | | || ||| | |||||| | ||| |||||| | | | |||| | |||
Sbjct 64741 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 64800
Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220
||| ||||| ||| || ||||||| ||| | ||||| |||||||| ||
Sbjct 64801 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 64860
Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280
|| | || || || | ||| | || || ||||| || ||||| | ||
Sbjct 64861 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 64920
Query 255281 TACGAGCGTGCCGGCCG 255297
|||||||||| |||||
Sbjct 64921 TACGAGCGTGAAGGCCG 64937
>seq244
Length=20637
Score = 95.1 bits (104), Expect = 4e-14
Identities = 211/317 (67%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| ||||||| | ||||||| || ||||| ||||| || || ||| ||| ||
Sbjct 680 CCTATGCTCCGTGTCTACAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGT 621
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| || || ||| |||||||||| ||||| ||||||||||||||| | || |
Sbjct 620 CCTGGTGCTTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATTATCCCCTTCCTCGAC 561
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
|| | | || ||| | |||||| | ||| |||||| | | | |||| | |||
Sbjct 560 CTTCGCAAGAACCACGGTAAGGAGGAGATCCGCGCTCGCGACCTTTTCTACGCTCTGTGG 501
Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220
||| ||||| ||| || ||||||| ||| | ||||| |||||||| ||
Sbjct 500 ATTCCCGACCTGTTCATGAAGCGTGTGGAACAGAACGGCAACTGGACTCTCATGTGCCCG 441
Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGGAG 255280
|| | || || || | ||| | || || ||||| || ||||| | ||
Sbjct 440 CACGAGTGCCCTGGCCTTGCCGATGTCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAG 381
Query 255281 TACGAGCGTGCCGGCCG 255297
|||||||||| |||||
Sbjct 380 TACGAGCGTGAAGGCCG 364
>seq720
Length=35757
Score = 91.5 bits (100), Expect = 5e-13
Identities = 102/136 (75%), Gaps = 3/136 (2%)
Strand=Plus/Minus
Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817
|| |||||||||||||||||||| |||||||| || ||| ||| |||||||| |||
Sbjct 30859 TTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGGCCGGCCTGACCTTCTCCAAC 30800
Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAA 443877
|| || ||| || |||||||| |||| ||||||||| || || |||| | ||
Sbjct 30799 GAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCTTGCCTGCTCTTCTCC--- 30743
Query 443878 CACATCGTGCACAAGC 443893
|| || ||||||||
Sbjct 30742 CAGCTCAAGCACAAGC 30727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588316483817755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |