Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq207 127 6e-24
seq894 109 2e-18
>seq207
Length=38899
Score = 127 bits (140), Expect = 6e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| || |||||||||||||| |||||||| || |
Sbjct 307 TTTGCATACCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGT 248
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || || || || ||||| ||||| | ||| ||||| |
Sbjct 247 AGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGT 188
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || || || || || ||||| || || | || || || || || | || || |
Sbjct 187 CTGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAG 128
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| || | ||||| || || || || || || || || |||||
Sbjct 127 ACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73
>seq894
Length=188349
Score = 109 bits (120), Expect = 2e-18
Identities = 449/707 (64%), Gaps = 11/707 (2%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
||||||| || ||||| | ||||| || || ||||| || | | | | | |||| |
Sbjct 36190 CCGCTATCGGTATCGACCTTGGTACCACGTACTCTTGCGTGGGTATCTTCCGTGATGACC 36131
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
| | || || ||||| || || || || ||| | || || || || | |||||| || |
Sbjct 36130 GCATCGAGATCATTGCCAACGACCAGGGCAACCGCACCACTCCCTCTTTCGTTGCCTTCA 36071
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| || |||||| |||| ||||| || || || || || | || || || | |
Sbjct 36070 CCGACACCGAGCGTCTGATCGGTGACTCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 36011
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432
| || || || || || ||||| || || || | | || ||| | ||
Sbjct 36010 ACACCGTCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCCAGGACGCTGAGGTC---- 35955
Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492
|| | || | || || || || |||| || || || | ||| || || |
Sbjct 35954 CAGGCCGACATGAAGCACTTCCCCTTTAAGGTCGTCGAGAAGGCCGGC---AAGCCCGTC 35898
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
| |||| || | || || || || | || ||||| || || || || |||
Sbjct 35897 ACCCAGGTCGAGTTCAAGGGCGAGACCAAGGACTTCACTCCCGAGGAGATCTCCTCCATG 35838
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
| | || ||| || | ||||| | || | |||| || || | |||||
Sbjct 35837 ATCCTCACCAAGATGCGCGAGACCGCTGAGTCCTACCTCGGTGGCACCGTTAACAATGCT 35778
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
|| || || || || ||||| || || || | ||||| || || || || || ||
Sbjct 35777 GTCATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCCGGT 35718
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
|| || || | || ||||| | || || || || || |||||||| || || ||
Sbjct 35717 CTGATCGCCGGTCTCAACGTTCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATCGCC 35658
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || ||||| || | | || || || || |||| || || ||| | ||||||
Sbjct 35657 TACGGTCTTGACAAGAAGCAGGAGGGTGAGAAGAACGTTCTCATCTTCGATCTTGGTGGT 35598
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
||||| || ||||| || || || || | || ||||| || || || || || | |||
Sbjct 35597 GGTACCTTCGATGTTTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACT 35538
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899
|| ||||| || || | ||||| || || || || || ||||||||
Sbjct 35537 GCCGGTGACACCCACTTGGGTGGCGAGGACTTCGACAACCGTCTCGT 35491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515235781785077
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |