Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq207 123 2e-23 seq886 114 1e-20 >seq207 Length=38899 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||| ||||||||| | || || || ||||| ||| |||| Sbjct 301 ATGCAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAATCGTCA 360 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||| || || || || || || || Sbjct 361 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAG 420 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || ||| || || | || || |||||| Sbjct 421 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACTACAAC 480 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||||||||| | || ||||| ||||| |||| || ||| Sbjct 481 ATCCAGAAGGAGTCGACTCTGCACTTGGTGCTGCGTCTGCGTGGCGGC 528 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || |||||||| || || | ||| Sbjct 73 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 132 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || || || Sbjct 133 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 192 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || || || | || || | || ||||||| |||||| Sbjct 193 CAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAAC 252 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| || | || ||||| | || | || ||||| || Sbjct 253 ATTCAAAAGGAGTCTACTCTTCACCTGGTTCTCCGCCTTCGTGGTGGTAT 302 >seq886 Length=122240 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| |||||||| | || || || ||||| ||| | || Sbjct 45657 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCA 45716 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||| || || || ||||| || || Sbjct 45717 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAG 45776 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || ||| || || | || || |||||| Sbjct 45777 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 45836 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||| ||| | || ||||| ||||| |||| || ||| Sbjct 45837 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGTGGCGGC 45884 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || |||||||| || || | ||| Sbjct 45429 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 45488 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || || || Sbjct 45489 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 45548 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || || || | |||||| || || | ||||| |||||| Sbjct 45549 CAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGTCCGACTACAAC 45608 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| || || ||||| Sbjct 45609 ATTCAGAAAGAATCGAC 45625 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||| ||| |||| || ||||| ||||| | |||||| | || || | || || Sbjct 45225 ACCGGTAAGACTATCACCCTTGAGGTGGAGTCCTCCGACACCATCGACAATGTGAAGAGC 45284 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| || ||||| || || || || |||||| | || | ||||||||| Sbjct 45285 AAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTTATCTTCGCCGGCAAG 45344 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 ||| | || ||| | ||| | |||||||||||||| || |||||| Sbjct 45345 CAACTCGAGGACGGCCGTACCCTCTCCGATTACAACATCCAGAAGGAG 45392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434913186415680