Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq207 123 2e-23
seq886 114 1e-20
>seq207
Length=38899
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || |||||||| ||||||||| | || || || ||||| ||| ||||
Sbjct 301 ATGCAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAATCGTCA 360
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||||||||| || || || || || || ||
Sbjct 361 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAG 420
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || | || ||| || || | || || ||||||
Sbjct 421 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACTACAAC 480
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||||||||| | || ||||| ||||| |||| || |||
Sbjct 481 ATCCAGAAGGAGTCGACTCTGCACTTGGTGCTGCGTCTGCGTGGCGGC 528
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || |||||| | || |||||||| || || | |||
Sbjct 73 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 132
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| || ||||| || || || ||
Sbjct 133 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 192
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| || || || | || || | || ||||||| ||||||
Sbjct 193 CAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAAC 252
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||| || | || ||||| | || | || ||||| ||
Sbjct 253 ATTCAAAAGGAGTCTACTCTTCACCTGGTTCTCCGCCTTCGTGGTGGTAT 302
>seq886
Length=122240
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||||| |||||||| | || || || ||||| ||| | ||
Sbjct 45657 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCA 45716
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||||||||| || || || ||||| || ||
Sbjct 45717 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAG 45776
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || | || ||| || || | || || ||||||
Sbjct 45777 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 45836
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || |||||||| ||| | || ||||| ||||| |||| || |||
Sbjct 45837 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGTGGCGGC 45884
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || |||||| | || |||||||| || || | |||
Sbjct 45429 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 45488
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| || ||||| || || || ||
Sbjct 45489 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 45548
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||| || || || | |||||| || || | ||||| ||||||
Sbjct 45549 CAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGTCCGACTACAAC 45608
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| || || |||||
Sbjct 45609 ATTCAGAAAGAATCGAC 45625
Score = 96.9 bits (106), Expect = 3e-15
Identities = 122/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||| ||| |||| || ||||| ||||| | |||||| | || || | || ||
Sbjct 45225 ACCGGTAAGACTATCACCCTTGAGGTGGAGTCCTCCGACACCATCGACAATGTGAAGAGC 45284
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| || ||||| || || || || |||||| | || | |||||||||
Sbjct 45285 AAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTTATCTTCGCCGGCAAG 45344
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
||| | || ||| | ||| | |||||||||||||| || ||||||
Sbjct 45345 CAACTCGAGGACGGCCGTACCCTCTCCGATTACAACATCCAGAAGGAG 45392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434913186415680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |