Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq581 118 1e-21
>seq581
Length=38060
Score = 118 bits (130), Expect = 1e-21
Identities = 299/452 (66%), Gaps = 47/452 (10%)
Strand=Plus/Plus
Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444
|| ||||| |||||| | ||||| |||||||| ||||||||| |||||||||| || ||
Sbjct 28236 CGCGAGGAAGGCGACCTCGGCCCCGTCTACGGTTTCCAGTGGCGACACTTTGGCGCCGAA 28295
Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTG-CAGTACGTGAT 34503
|| | || || | || ||||| | || ||||| | ||||||||| ||| | ||| |
Sbjct 28296 TACCAGGACCGCAACGCAGACTACACCGGTCAGGGTGTCGACCAGCTGGCAGAA-GTGGT 28354
Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563
|| | ||| ||||||| | ||| | | ||| | | |||| ||||||||
Sbjct 28355 GCGCAAGCTAAAGGAGAACCCTTACGACCGCCGAATCATTCTCAGCGCCTGGAACCCCGC 28414
Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC----- 34618
||||||| ||||| ||||| || ||||||| || || |||||||||
Sbjct 28415 GGATCTCAAGAAAATGGCCCTCCCTCCTTGCCACATGTTCGCGCAGTTCTACGTCTCCTT 28474
Query 34619 ----------------------GCGAATGG----------GGA--GCTGTCCTGC-CAGC 34643
||| |||| ||| ||| || || | |
Sbjct 28475 CCCGGCTTCGGCACCCGCGCGAGCGGATGGTTCGAAGAAGGGAACGCT-TCACGCTCTTC 28533
Query 34644 TCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTC 34703
||||||| || ||| | |||||||| | || ||||| |||||||||||| ||||||
Sbjct 28534 TCTATCAGCGCTCGTGCGACATGGGTCTGGGCGTGCCTTTCAACATTGCTTCGTACGCTT 28593
Query 34704 TGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGC-TGGTGCATAC 34761
|||||||| ||||| | || | | | || | ||||| ||| || ||| || ||| ||
Sbjct 28594 TGCTCACGCACATGCTGGC-GAGGACTTGCGATTTGGTGCCT-GGCAGCTTGACGCACAC 28651
Query 34762 GTTGGGGGATGCGCATATCTACCTGAACCACA 34793
|||| ||||||||| ||||| || | ||||
Sbjct 28652 AATGGGCGATGCGCATGTCTACATGGATCACA 28683
Score = 118 bits (130), Expect = 1e-21
Identities = 299/452 (66%), Gaps = 47/452 (10%)
Strand=Plus/Minus
Query 6552 TGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCA-GCTCCCCAGGAACCAAC 6610
|||| | || ||||| ||||||||| |||| || ||| || ||| || ||| |||||
Sbjct 28683 TGTGATCCATGTAGACATGCGCATCGCCCATTGTGTGCGTCAAGCTGCC-AGGCACCAAA 28625
Query 6611 CC-CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCAC 6669
| || | | | || | ||||| |||||||| |||||| |||||||||||| |||||
Sbjct 28624 TCGCAAGTCCTC-GCCAGCATGTGCGTGAGCAAAGCGTACGAAGCAATGTTGAAAGGCAC 28566
Query 6670 CCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTG-GCAGGACAGC--TCC-------- 6718
|| | |||||||| | ||| || |||||||| | || || ||| |||
Sbjct 28565 GCCCAGACCCATGTCGCACGAGCGCTGATAGAGAAGAGCGTGA-AGCGTTCCCTTCTTCG 28507
Query 6719 --CCATTCGC---------------------------GACGTAGAATTGGCAGAGGGTGT 6749
|||| ||| ||||||||| || || |||
Sbjct 28506 AACCATCCGCTCGCGCGGGTGCCGAAGCCGGGAAGGAGACGTAGAACTGCGCGAACATGT 28447
Query 6750 GGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCC 6809
|||| || ||||| ||||| ||||||| |||||||| |||| | | ||| |
Sbjct 28446 GGCAAGGAGGGAGGGCCATTTTCTTGAGATCCGCGGGGTTCCAGGCGCTGAGAATGATTC 28387
Query 6810 TTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTG-CAGCTGGTCCGCTCCC 6868
| ||| | ||||||| ||| | || | ||| | ||| ||||||||| | |||
Sbjct 28386 GGCGGTCGTAAGGGTTCTCCTTTAGCTTGCGCACCAC-TTCTGCCAGCTGGTCGACACCC 28328
Query 6869 TGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAAC 6928
|| || | ||||| || | || || | || || || |||||||||| |||||||||
Sbjct 28327 TGACCGGTGTAGTCTGCGTTGCGGTCCTGGTATTCGGCGCCAAAGTGTCGCCACTGGAAA 28268
Query 6929 CCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960
|||||||| ||||| | |||||| ||||| ||
Sbjct 28267 CCGTAGACGGGGCCGAGGTCGCCTTCCTCGCG 28236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257026454480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |