Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq886 161 2e-34
seq207 158 3e-33
seq959 147 5e-30
seq360 147 5e-30
seq767 91.5 3e-13
seq251 91.5 3e-13
seq900 89.7 1e-12
seq710 86.0 1e-11
seq244 86.0 1e-11
>seq886
Length=122240
Score = 161 bits (178), Expect = 2e-34
Identities = 155/199 (78%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| |||||||| ||| ||| || |||||||| ||||| | |||||
Sbjct 45421 CGAAGGCGGAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTA 45362
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || || |||||||| ||||||||||| || || ||||| ||||||| ||
Sbjct 45361 CGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGAGGAATGCCC 45302
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| ||||| || ||||||||||| ||| || ||||| ||
Sbjct 45301 TCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGG 45242
Query 211074 GTGATCGTCTTTCCCGTGA 211092
||||| ||||| || ||||
Sbjct 45241 GTGATAGTCTTACCGGTGA 45223
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || |||||||| || |||||||| || |||| || || | || ||
Sbjct 45868 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCC 45809
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| || |||||||| || | || ||||||||
Sbjct 45808 TCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCT 45749
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||||||||| ||| |||||| ||||| ||||| ||
Sbjct 45748 TGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTT 45689
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | |||||
Sbjct 45688 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| ||||| ||||| || ||||| || ||||| || || | || ||
Sbjct 45649 CGAAGGCGGAGGACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTG 45590
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| |||||||| || |||||||| | ||| || ||||| || || | ||
Sbjct 45589 CGACCGTCTTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCC 45530
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| || ||||| ||||| ||||| || || ||||| |||
Sbjct 45529 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGA 45470
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| || || | |||||
Sbjct 45469 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 45429
>seq207
Length=38899
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || ||||||||||| ||||| ||||| ||||| || || | ||| ||
Sbjct 294 ACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGT 235
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| | || || ||||| || || | ||
Sbjct 234 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCC 175
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| ||||| ||||| || || ||||| ||
Sbjct 174 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAG 115
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || ||||| ||||| || || | |||||
Sbjct 114 AGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||| ||||| || |||||||| || |||| || || | || ||
Sbjct 512 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCC 453
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| || |||||||| || | || ||||||||
Sbjct 452 TCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCT 393
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||||||||| || |||||| ||||| ||||| |||
Sbjct 392 TGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTC 333
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| || || || | |||||
Sbjct 332 TTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301
>seq959
Length=197118
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||||| | || || || ||||||||||| ||||||||
Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || |||| || ||||||||||||||||| ||||| || |||
Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 40954
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||||||| || |||||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 40953 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40895
>seq360
Length=83424
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||||| | || || || ||||||||||| ||||||||
Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| || |||| || ||||||||||||||||| ||||| || |||
Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 99
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||||||| || |||||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 98 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40
>seq767
Length=59936
Score = 91.5 bits (100), Expect = 3e-13
Identities = 185/275 (67%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
|||||| ||||||||||| | | ||| || ||||| ||||| || | ||
Sbjct 58959 GTTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 59018
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | || ||| |||||||| || ||||| || ||| || || || |||| |
Sbjct 59019 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 59078
Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272
|||||| ||||||||| | ||| || ||||||| ||| || |||||||| |
Sbjct 59079 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 59138
Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332
|| || || ||| | ||||| | |||| |||| | |||| | | ||| || ||
Sbjct 59139 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 59198
Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
|||||| ||||| | |||| | || |||||||
Sbjct 59199 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 59233
>seq251
Length=65300
Score = 91.5 bits (100), Expect = 3e-13
Identities = 185/275 (67%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
|||||| ||||||||||| | | ||| || ||||| ||||| || | ||
Sbjct 65058 GTTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 64999
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | || ||| |||||||| || ||||| || ||| || || || |||| |
Sbjct 64998 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 64939
Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272
|||||| ||||||||| | ||| || ||||||| ||| || |||||||| |
Sbjct 64938 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 64879
Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332
|| || || ||| | ||||| | |||| |||| | |||| | | ||| || ||
Sbjct 64878 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 64819
Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
|||||| ||||| | |||| | || |||||||
Sbjct 64818 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 64784
>seq900
Length=35157
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||| ||| || |||||||| || || | ||||| | || ||
Sbjct 26501 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 26442
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| ||||| || ||||| || |||| || ||||||||
Sbjct 26441 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 26383
>seq710
Length=16846
Score = 86.0 bits (94), Expect = 1e-11
Identities = 184/275 (67%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
||| || ||||||||||| | | ||| || ||||| ||||| || | ||
Sbjct 15869 GTTTTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 15928
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | || ||| |||||||| || ||||| || ||| || || || |||| |
Sbjct 15929 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 15988
Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272
|||||| ||||||||| | ||| || ||||||| ||| || |||||||| |
Sbjct 15989 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 16048
Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332
|| || || ||| | ||||| | |||| |||| | |||| | | ||| || ||
Sbjct 16049 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 16108
Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
|||||| ||||| | |||| | || |||||||
Sbjct 16109 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 16143
>seq244
Length=20637
Score = 86.0 bits (94), Expect = 1e-11
Identities = 184/275 (67%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
||| || ||||||||||| | | ||| || ||||| ||||| || | ||
Sbjct 243 GTTTTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 302
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | || ||| |||||||| || ||||| || ||| || || || |||| |
Sbjct 303 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 362
Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272
|||||| ||||||||| | ||| || ||||||| ||| || |||||||| |
Sbjct 363 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 422
Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332
|| || || ||| | ||||| | |||| |||| | |||| | | ||| || ||
Sbjct 423 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 482
Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
|||||| ||||| | |||| | || |||||||
Sbjct 483 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159137757282035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |