Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq886 161 2e-34 seq207 158 3e-33 seq959 147 5e-30 seq360 147 5e-30 seq767 91.5 3e-13 seq251 91.5 3e-13 seq900 89.7 1e-12 seq710 86.0 1e-11 seq244 86.0 1e-11 >seq886 Length=122240 Score = 161 bits (178), Expect = 2e-34 Identities = 155/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| |||||||| ||| ||| || |||||||| ||||| | ||||| Sbjct 45421 CGAAGGCGGAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTA 45362 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || || |||||||| ||||||||||| || || ||||| ||||||| || Sbjct 45361 CGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGAGGAATGCCC 45302 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| ||||| || ||||||||||| ||| || ||||| || Sbjct 45301 TCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGG 45242 Query 211074 GTGATCGTCTTTCCCGTGA 211092 ||||| ||||| || |||| Sbjct 45241 GTGATAGTCTTACCGGTGA 45223 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || |||||||| || |||||||| || |||| || || | || || Sbjct 45868 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCC 45809 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || |||||||| || | || |||||||| Sbjct 45808 TCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCT 45749 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| ||| |||||| ||||| ||||| || Sbjct 45748 TGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACTTCGAGTGTGATGGTT 45689 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | ||||| Sbjct 45688 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| ||||| ||||| || ||||| || ||||| || || | || || Sbjct 45649 CGAAGGCGGAGGACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCGGACAGAGTG 45590 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||| |||||||| || |||||||| | ||| || ||||| || || | || Sbjct 45589 CGACCGTCTTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTGGCGGGATGCCC 45530 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||| ||||| || || ||||| ||| Sbjct 45529 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGA 45470 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 45469 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 45429 >seq207 Length=38899 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||||||||| ||||| ||||| ||||| || || | ||| || Sbjct 294 ACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGAGT 235 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||| || |||||||| | || || ||||| || || | || Sbjct 234 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGGATGCC 175 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||| ||||| || || ||||| || Sbjct 174 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAG 115 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||| || ||||| ||||| || || | ||||| Sbjct 114 AGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| ||||| || |||||||| || |||| || || | || || Sbjct 512 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGACCGTCC 453 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || |||||||| || | || |||||||| Sbjct 452 TCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCT 393 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || |||||| ||||| ||||| ||| Sbjct 392 TGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACTTCGAGTGTGATGGTC 333 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || || || | ||||| Sbjct 332 TTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq959 Length=197118 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | || || || ||||||||||| |||||||| Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || |||| || ||||||||||||||||| ||||| || ||| Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 40954 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||||||| || |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 40953 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40895 >seq360 Length=83424 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | || || || ||||||||||| |||||||| Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || |||| || ||||||||||||||||| ||||| || ||| Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCG 99 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||||||| || |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 98 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40 >seq767 Length=59936 Score = 91.5 bits (100), Expect = 3e-13 Identities = 185/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||| ||||||||||| | | ||| || ||||| ||||| || | || Sbjct 58959 GTTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 59018 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | || ||| |||||||| || ||||| || ||| || || || |||| | Sbjct 59019 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 59078 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 |||||| ||||||||| | ||| || ||||||| ||| || |||||||| | Sbjct 59079 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 59138 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || || || ||| | ||||| | |||| |||| | |||| | | ||| || || Sbjct 59139 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 59198 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 |||||| ||||| | |||| | || ||||||| Sbjct 59199 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 59233 >seq251 Length=65300 Score = 91.5 bits (100), Expect = 3e-13 Identities = 185/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||| ||||||||||| | | ||| || ||||| ||||| || | || Sbjct 65058 GTTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 64999 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | || ||| |||||||| || ||||| || ||| || || || |||| | Sbjct 64998 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 64939 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 |||||| ||||||||| | ||| || ||||||| ||| || |||||||| | Sbjct 64938 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 64879 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || || || ||| | ||||| | |||| |||| | |||| | | ||| || || Sbjct 64878 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 64819 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 |||||| ||||| | |||| | || ||||||| Sbjct 64818 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 64784 >seq900 Length=35157 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || | ||||| | || || Sbjct 26501 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 26442 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || ||||| || |||| || |||||||| Sbjct 26441 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 26383 >seq710 Length=16846 Score = 86.0 bits (94), Expect = 1e-11 Identities = 184/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 ||| || ||||||||||| | | ||| || ||||| ||||| || | || Sbjct 15869 GTTTTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 15928 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | || ||| |||||||| || ||||| || ||| || || || |||| | Sbjct 15929 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 15988 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 |||||| ||||||||| | ||| || ||||||| ||| || |||||||| | Sbjct 15989 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 16048 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || || || ||| | ||||| | |||| |||| | |||| | | ||| || || Sbjct 16049 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 16108 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 |||||| ||||| | |||| | || ||||||| Sbjct 16109 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 16143 >seq244 Length=20637 Score = 86.0 bits (94), Expect = 1e-11 Identities = 184/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 ||| || ||||||||||| | | ||| || ||||| ||||| || | || Sbjct 243 GTTTTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 302 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | || ||| |||||||| || ||||| || ||| || || || |||| | Sbjct 303 CTCGACCTGCGCCTCGAGAATGGCATACCAAACCTTCTGAGCGCGAACGGTCTCGCGACC 362 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 |||||| ||||||||| | ||| || ||||||| ||| || |||||||| | Sbjct 363 GCGGCCTTCACGCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGACATCGGC 422 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || || || ||| | ||||| | |||| |||| | |||| | | ||| || || Sbjct 423 AAGGCCAGGGCACTCGTGCGGGCACATGAGAGTCCAGTTGCCGTTCTGTTCCACACGCTT 482 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 |||||| ||||| | |||| | || ||||||| Sbjct 483 CATGAACAGGTCGGGAATCCACAGAGCGTAGAAAA 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159137757282035