Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq886 89.7 3e-13 seq207 86.0 4e-12 >seq886 Length=122240 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||| | Sbjct 45657 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCA 45716 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || ||| | || || || || Sbjct 45717 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAG 45776 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || || || || || || |||| ||||| | || |||||| Sbjct 45777 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 45836 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 45837 ATCCAGAAGGAGTCCAC 45853 >seq207 Length=38899 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||| ||||| || || || ||||| ||||||||||| || | Sbjct 301 ATGCAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAATCGTCA 360 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || ||| | ||||| || || Sbjct 361 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAG 420 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || || || || || || |||| ||||| | || |||||| Sbjct 421 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACTACAAC 480 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 481 ATCCAGAAGGAGTCGAC 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338005649407172