Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq886 89.7 3e-13
seq207 86.0 4e-12
>seq886
Length=122240
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| ||| |
Sbjct 45657 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCA 45716
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| ||||| || ||| | || || || ||
Sbjct 45717 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAG 45776
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || || || || || || |||| ||||| | || ||||||
Sbjct 45777 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 45836
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 45837 ATCCAGAAGGAGTCCAC 45853
>seq207
Length=38899
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| ||||| ||||| || || || ||||| ||||||||||| || |
Sbjct 301 ATGCAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAATCGTCA 360
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| ||||| || ||| | ||||| || ||
Sbjct 361 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAG 420
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || || || || || || |||| ||||| | || ||||||
Sbjct 421 CAGCGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACTACAAC 480
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 481 ATCCAGAAGGAGTCGAC 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005649407172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |