Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq207 187 5e-42 seq886 159 7e-34 seq959 150 4e-31 seq360 150 4e-31 seq900 111 3e-19 seq737 100 6e-16 seq339 100 6e-16 seq720 95.1 3e-14 >seq207 Length=38899 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | || || ||||| ||||||||||| | Sbjct 300 ACCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGA 241 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || || || ||||||||||| || ||||| ||| Sbjct 240 AAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGG 181 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||||||||| |||| ||||| Sbjct 180 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGAC 121 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||||| || ||||| Sbjct 120 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||| || | || || || |||||||||||||| | Sbjct 527 CCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAC 468 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || || || ||||| | || || |||||| ||| Sbjct 467 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 408 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||| ||||| | || ||| | ||||| ||||| || | ||| ||| Sbjct 407 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAACT 348 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||| || ||||| || ||||| Sbjct 347 TCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq886 Length=122240 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || ||||| || ||||| || | || |||||| || ||||||||||| | Sbjct 45656 ACCTCCGCGAAGGCGGAGGACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCGGA 45597 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || || || || || || |||||||| || || ||||| ||| Sbjct 45596 CAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTGGCGG 45537 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||||||||| |||| ||||| Sbjct 45536 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGAC 45477 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||||| || ||||| Sbjct 45476 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 45429 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||| || | ||| || || |||||||||||||| | Sbjct 45883 CCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 45824 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || || || ||||| | || || |||||| || Sbjct 45823 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGGG 45764 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||| ||||| | || ||| | ||||| ||||| || | ||| ||| Sbjct 45763 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAACT 45704 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || || || | |||||| ||||| || ||||| Sbjct 45703 TCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Score = 138 bits (152), Expect = 2e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || || || || | ||||| || || ||||||||||| || | Sbjct 45428 ACCACCGCGAAGGCGGAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCGGA 45369 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| ||||| || ||||| ||||| | ||| || ||||| || Sbjct 45368 GAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGAGG 45309 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||| ||||| || || | ||||| ||||| || | || | Sbjct 45308 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCCA 45250 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | || || ||||| |||||||| || Sbjct 45249 CCTCAAGGGTGATAGTCTTACCGGT 45225 >seq959 Length=197118 Score = 150 bits (166), Expect = 4e-31 Identities = 143/180 (79%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || |||||||| ||||| || || || ||||| |||||| Sbjct 41073 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 41014 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATC 283030 | ||| || ||||| ||||| ||||||||||| |||||||| ||| || || | || Sbjct 41013 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTC 40955 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | ||||| ||||| ||||| ||||| ||||||| ||||||||||| Sbjct 40954 GATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40895 >seq360 Length=83424 Score = 150 bits (166), Expect = 4e-31 Identities = 143/180 (79%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || |||||||| ||||| || || || ||||| |||||| Sbjct 218 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 159 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATC 283030 | ||| || ||||| ||||| ||||||||||| |||||||| ||| || || | || Sbjct 158 AGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTC 100 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | ||||| ||||| ||||| ||||| ||||||| ||||||||||| Sbjct 99 GATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAA 40 >seq900 Length=35157 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||||| || || |||||||||||||| | Sbjct 26517 ACCACCACGGAGACGAAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 26458 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 26457 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGG 26398 Query 282992 AATACCCTCCTTGTCT 283007 ||| |||||||||||| Sbjct 26397 AATGCCCTCCTTGTCT 26382 >seq737 Length=90910 Score = 100 bits (110), Expect = 6e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||||| |||| ||| || |||||||||| || |||||| Sbjct 89017 AGGAGTTCCTGACTGACGCCCTTCCCTGCGCCCTGCTCGGCATGAACGCCACCCTCATGT 89076 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | || || ||||| ||||| || || || | |||| || || || || || | | Sbjct 89077 GCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACACCAAGTTCT 89136 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| |||||||||| || |||||| ||| || ||| || || || |||| Sbjct 89137 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACT 89196 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | ||||||| Sbjct 89197 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGT 89236 >seq339 Length=84225 Score = 100 bits (110), Expect = 6e-16 Identities = 265/392 (68%), Gaps = 12/392 (3%) Strand=Plus/Minus Query 274434 ATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACAACTA 274493 ||||||||||| || | | ||||||| || |||| || |||| ||| ||||| Sbjct 16822 ATGGGCGTGATGAACTCCATCAGGAAGCCAGGAAGTTTGAGCAAACTAGGGAACTGGACC 16763 Query 274494 TGGAAAAAGTTCATGACAAGACC--TGATATGTGAGTTCCGTCAACGTCGGCATCTGTCA 274551 || | ||||| |||| ||| || ||||||| ||| |||||| || ||| |||| Sbjct 16762 TGCAGGAAGTTGATGAGAAGGCCCTTGATATGAGAG--CCGTCATGATCTTGATCGGTCA 16705 Query 274552 TGATCATAACATGTCCATACCG-AAGCGAGGAAGTATCTTTATACAACTTCCCTGT-TTG 274609 ||||||| | || || || || |||| |||||| || | | | | ||| || Sbjct 16704 TGATCATGAGGTGACCGTAACGCAAGC-CCTTGGTATCTGCGTA-ATCCTTCTTGTGCTG 16647 Query 274610 AAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCG-CCACA 274667 ||| || | || | ||||| | | | |||||||| |||||||| ||| || | | ||| Sbjct 16646 AAGTCCCATAAACTTCTTGATGTTCTG-GATTTCTTGGTTCTTTGAGAT-CTGGTCGACA 16589 Query 274668 GAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGCGC 274727 | ||||| || |||||||| | |||||| || |||||||| || || | ||| | Sbjct 16588 GTCGCATCGCGGACGTTCAGAAGCTTACCACGAAGAGGGAAGACACCGAAAAGGTCGGGA 16529 Query 274728 CCGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGAATC 274787 || ||| | | | || || | ||| || | || || || || || ||||||||| Sbjct 16528 TTGACGACTGCACGTCCAGCCAGCGCAAGGAGAGAGGCCGAGTCACCTTCAGTGAGAATC 16469 Query 274788 AAAGTACACAACTTACTGTTTTTTGTGCCTGC 274819 | ||| ||| | | || ||| ||||| || Sbjct 16468 AGAGTGCACTTGTAGCCGTCTTTGGTGCCGGC 16437 >seq720 Length=35757 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||||| |||| || || |||||||||| || |||||| Sbjct 30675 AGGAGTTCCTGACTGACGCCCTTCCCTGTGCGCTGCTCGGCATGAACGCCACCCTCATGT 30616 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | || || ||||| ||||| || || || | |||| || || || || || | | Sbjct 30615 GCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTTGGCAACACCAAGTTCT 30556 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| |||||||||| || |||||| ||| || ||| || || || |||| Sbjct 30555 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACT 30496 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | ||||||| Sbjct 30495 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGT 30456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046726338519186