Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017-
02-15] 959 sequences; 50,156,125 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq886 159 8e-34
seq207 154 4e-32
seq959 125 2e-23
seq360 125 2e-23
>seq886
Length=122240
Score = 159 bits (176), Expect = 8e-34
Identities = 159/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| || ||||| ||||| ||||| || ||| |||||||
Sbjct 45660 CAAATCTTCGTCAAGACTCTCACCGGCAAAACCATCACACTCGAAGTTGAATCCTCAGAC 45719
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| ||||| || || ||||| || ||||||||
Sbjct 45720 ACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAG 45779
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| || || | || || | || || ||| ||
Sbjct 45780 CGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAACATC 45839
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 45840 CAGAAGGAGTCCACCCTGCA-CTTG 45863
Score = 129 bits (142), Expect = 1e-24
Identities = 130/169 (77%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || |||||||| |||||||| ||| ||||||||||| || || ||
Sbjct 45223 TCACCGGTAAGACTATCACCCTTGAGGTGGAGTCCTCCGACACCATCGACAATGTGAAGA 45282
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| || || || ||||| |||||||| || |||||||||||||| |
Sbjct 45283 GCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTTATCTTCGCCGGCA 45342
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111
| || ||||| || || | || || ||||||| ||| |||| || ||
Sbjct 45343 AGCAACTCGAGGACGGCCGTACCCTCTCCGATTACAACATCCAGAAGGA 45391
>seq207
Length=38899
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||||||||| || || || ||||| ||||| || ||| ||||||
Sbjct 304 CAAATCTTCGTCAAAACTCTCACCGGCAAGACCATCACACTCGAAGTTGAATCGTCAGAC 363
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| ||||| || || ||||| || ||||||||
Sbjct 364 ACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAGCAG 423
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| || || | || || | || || ||| ||
Sbjct 424 CGCCTCATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGTCGGACTACAACATC 483
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 484 CAGAAGGAGTCGACTCTGCA-CTTG 507
>seq959
Length=197118
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || || || || || || |||||||||||||| || ||| |||||||||
Sbjct 40895 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 40954
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || || || ||||| |||||||| || || || || || |||||||| || ||
Sbjct 40955 GACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTG 41014
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || |||||||| || || | || || |||| || ||| |||| ||
Sbjct 41015 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 41073
>seq360
Length=83424
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || || || || || || |||||||||||||| || ||| |||||||||
Sbjct 40 TTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 99
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || || || ||||| |||||||| || || || || || |||||||| || ||
Sbjct 100 GACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTG 159
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || |||||||| || || | || || |||| || ||| |||| ||
Sbjct 160 ATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAA 218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203716409529046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |