Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosporium_20sphaerospermum_20[genbank_20GCA_5F001931905.2_202017- 02-15] 959 sequences; 50,156,125 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq900 152 5e-32 seq959 141 9e-29 seq360 141 9e-29 seq886 131 2e-25 seq207 120 3e-22 seq160 111 1e-19 >seq900 Length=35157 Score = 152 bits (168), Expect = 5e-32 Identities = 116/137 (85%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || ||||| | ||| || || || |||||||||||||| ||||| |||||| Sbjct 26519 CCACCACCACGGAGACGAAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 26460 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||| | | Sbjct 26459 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGG 26400 Query 41753 GGAACGCTCTCCTTGTC 41769 |||| || ||||||||| Sbjct 26399 GGAATGCCCTCCTTGTC 26383 >seq959 Length=197118 Score = 141 bits (156), Expect = 9e-29 Identities = 142/182 (78%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| | Sbjct 41075 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 41016 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||| | ||||| || |||||||||| ||| || |||| || | Sbjct 41015 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACATTG 40957 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||| | || || || || |||||||| ||||| ||| Sbjct 40956 TCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACG 40897 Query 41852 AA 41853 || Sbjct 40896 AA 40895 >seq360 Length=83424 Score = 141 bits (156), Expect = 9e-29 Identities = 142/182 (78%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| | Sbjct 220 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 161 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||| | ||||| || |||||||||| ||| || |||| || | Sbjct 160 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACATTG 102 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||| | || || || || |||||||| ||||| ||| Sbjct 101 TCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACG 42 Query 41852 AA 41853 || Sbjct 41 AA 40 >seq886 Length=122240 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | || || || || |||||||||||||| ||||| || |||||| Sbjct 45427 CCACCGCGAAGGCGGAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAG 45368 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||| |||||||||||||| || || ||||| ||||| | ||| Sbjct 45367 AGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCTGGAGGA 45308 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| || | | | |||||| |||||||| Sbjct 45307 ATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACATTGTCGATGGTGTCGGAGGACTCCAC 45249 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || ||||| || Sbjct 45248 CTCAAGGGTGATAGTCTTACCGGT 45225 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| ||||| ||| ||||||||| ||||| ||||| || Sbjct 45884 GCCGCCACGCAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 45825 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| ||||||||||| || ||||| || |||||||| ||||| | || Sbjct 45824 GAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGTGG 45765 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | ||| | || | | ||| | | | ||||| || || | Sbjct 45764 GATACCCTCCTTGT-CTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGATTCAA 45706 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || ||||| || || || ||||| ||||| || ||||| Sbjct 45705 CTTCGAGTGTGATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 45657 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||| || || || || ||||||||||| |||||||| Sbjct 45655 CCTCCGCGAAGGCGGAGGACCAGGTGGAGAGTCGATTCTTTCTGAATGTTGTAGTCGGAC 45596 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || ||||| |||| |||||| ||||| | || Sbjct 45595 AGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCTGGCGGG 45536 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||||| ||||| || Sbjct 45535 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTGTCGGAAGACTCGAC 45477 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| || ||||| Sbjct 45476 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 45429 >seq207 Length=38899 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || || |||||| |||||||| |||||||| Sbjct 299 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAA 240 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||| || ||||| |||| ||||| ||||| | || Sbjct 239 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCTGGCGGG 180 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||||| ||||| || Sbjct 179 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTGTCGGAAGACTCGAC 121 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| || ||||| Sbjct 120 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 73 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| ||||| || ||||||||| ||||| ||||| || Sbjct 528 GCCGCCACGCAGACGCAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 469 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| ||||||||||| || ||||| || |||||||| ||||| | || Sbjct 468 CAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGCGG 409 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | ||| | || | | ||| | | | ||||| ||| || | Sbjct 408 GATACCCTCCTTGT-CTTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGACGATTCAA 350 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || || || || || || || || ||||| || ||||| Sbjct 349 CTTCGAGTGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 301 >seq160 Length=27641 Score = 111 bits (122), Expect = 1e-19 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || |||||||||||||| | |||||||||||| || ||||| ||||| |||||| Sbjct 9185 AGGTGGAGGGTGCTCTCCTTCTGGACGTTATAGTCGGACAGAGTGCGGTCGTCCTCGAGC 9244 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTG 41745 |||||||||||||| ||||||||||| || Sbjct 9245 TGCTTGCCGGCGAAGATCAGGCGCTGATG 9273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298458130800