Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq46 113 1e-19
>seq46
Length=404262
Score = 113 bits (124), Expect = 1e-19
Identities = 176/252 (70%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || ||||| || | ||| | |||||| | || ||| | || |||
Sbjct 337846 ATCATCACCGAAGCTGTCACCATCGAGCAAGAGTTCCTCACAGAAGCTCTACCGTGTGCT 337905
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
||| | ||||||||| | | || ||| | ||||||||||| ||||| ||||||||| |
Sbjct 337906 CTTCTCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 337965
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| | || || || || | || | |||||| | | |||||||| | || ||||||
Sbjct 337966 CTCTTGGCTCTCGGCAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 338025
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| ||||| || ||||| ||||||||||| ||| | ||| |||| || |||| |
Sbjct 338026 AACATCTCGCTGGCCGGTAAGACAAACTTCTTCGAGAAGAGGGTCGGTGATTACCAGAAG 338085
Query 230626 CCTGGTGTGATG 230637
| ||||| |||
Sbjct 338086 GCCGGTGTCATG 338097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057813685885430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |