Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq46 113 1e-19 >seq46 Length=404262 Score = 113 bits (124), Expect = 1e-19 Identities = 176/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || ||||| || | ||| | |||||| | || ||| | || ||| Sbjct 337846 ATCATCACCGAAGCTGTCACCATCGAGCAAGAGTTCCTCACAGAAGCTCTACCGTGTGCT 337905 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | ||||||||| | | || ||| | ||||||||||| ||||| ||||||||| | Sbjct 337906 CTTCTCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 337965 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | || || || || | || | |||||| | | |||||||| | || |||||| Sbjct 337966 CTCTTGGCTCTCGGCAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 338025 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| ||||| || ||||| ||||||||||| ||| | ||| |||| || |||| | Sbjct 338026 AACATCTCGCTGGCCGGTAAGACAAACTTCTTCGAGAAGAGGGTCGGTGATTACCAGAAG 338085 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 338086 GCCGGTGTCATG 338097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057813685885430