Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq46 95.1 1e-14
>seq46
Length=404262
Score = 95.1 bits (104), Expect = 1e-14
Identities = 204/302 (68%), Gaps = 6/302 (2%)
Strand=Plus/Minus
Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287
||| | || || |||||||| | || ||| |||| ||||| |||||||||||
Sbjct 337474 TCGCTGATGTAGGTATCGATCAAGAGCGAGTATGTTTCCGAGTGGATGTTCTCCATCATG 337415
Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347
||||| || ||||| |||||||| || || | | ||| || || || || || ||
Sbjct 337414 ATCTGGAAGCCGTAGAAGCATCGCGCCTCGGGCACTTGCACCTCTCCGCTAAAGCGCTCG 337355
Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407
| || || ||||| |||||||||||| |||||||| || || | | || |||
Sbjct 337354 ACCAGGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATG 337295
Query 17408 AAATATTTTTCGTCCGGTGTAAGAACGC----GCCAGTCCTTTAAATCTTTGGATATATC 17463
|| | |||| || || | ||| |||||| | | |||||||| | |||
Sbjct 337294 AAGAAGCGCTCGT-CGTCGTTCAATCGCTTGTTCCAGTCGTGGAGGTCTTTGGAGAGATC 337236
Query 17464 CACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATT 17523
| ||||||| |||||||||| || | ||||| || ||||| | ||| || | |||
Sbjct 337235 GATCTCTTCGGCGGTCCAAAAAGAGGCTTCGGCCTTCTTGTACATTTGCCAGATCT-ATT 337177
Query 17524 GT 17525
||
Sbjct 337176 GT 337175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517540676847480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |