Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq46 95.1 1e-14 >seq46 Length=404262 Score = 95.1 bits (104), Expect = 1e-14 Identities = 204/302 (68%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 ||| | || || |||||||| | || ||| |||| ||||| ||||||||||| Sbjct 337474 TCGCTGATGTAGGTATCGATCAAGAGCGAGTATGTTTCCGAGTGGATGTTCTCCATCATG 337415 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 ||||| || ||||| |||||||| || || | | ||| || || || || || || Sbjct 337414 ATCTGGAAGCCGTAGAAGCATCGCGCCTCGGGCACTTGCACCTCTCCGCTAAAGCGCTCG 337355 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407 | || || ||||| |||||||||||| |||||||| || || | | || ||| Sbjct 337354 ACCAGGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATG 337295 Query 17408 AAATATTTTTCGTCCGGTGTAAGAACGC----GCCAGTCCTTTAAATCTTTGGATATATC 17463 || | |||| || || | ||| |||||| | | |||||||| | ||| Sbjct 337294 AAGAAGCGCTCGT-CGTCGTTCAATCGCTTGTTCCAGTCGTGGAGGTCTTTGGAGAGATC 337236 Query 17464 CACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATT 17523 | ||||||| |||||||||| || | ||||| || ||||| | ||| || | ||| Sbjct 337235 GATCTCTTCGGCGGTCCAAAAAGAGGCTTCGGCCTTCTTGTACATTTGCCAGATCT-ATT 337177 Query 17524 GT 17525 || Sbjct 337176 GT 337175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540676847480