Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq634 214 2e-50
>seq634
Length=211807
Score = 214 bits (236), Expect = 2e-50
Identities = 601/907 (66%), Gaps = 28/907 (3%)
Strand=Plus/Plus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
|| |||||||| || | || | | |||| ||||| ||| | ||| || | | | |
Sbjct 37365 TCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTC 37424
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070
|||||||| | ||||| || || ||||| ||||| ||||||||||| ||||| ||
Sbjct 37425 CACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAC 37484
Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130
| ||| | || | || || || || ||||| |||||| ||||| |||| |
Sbjct 37485 AAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAA-GCCAAA 37543
Query 54131 -ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
| ||| | ||||| || || | ||| |||| | | | || || || || || || ||
Sbjct 37544 GACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACC 37603
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||| || | || | ||||||||| ||||| || | | ||| || || | || |||||
Sbjct 37604 CTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGA 37663
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA--ATTGATAGA 54307
| || || || || ||| || || ||||||| || | | |||| |||
Sbjct 37664 CGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTG--AGA 37721
Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCC 54366
|| || || || || | || ||||| | ||||| ||| || | ||| || ||||||||
Sbjct 37722 CCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA-CGTCTTCAGCGTGTCGTAGATGCC 37780
Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAG 54425
|| || || |||||| | || | | || || ||| ||||| || | | | | |
Sbjct 37781 TTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGT-G 37839
Query 54426 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTG 54484
|||| || || || | || ||||| ||||| || || |||| | || | |||| |||
Sbjct 37840 TTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAG-TTG 37898
Query 54485 TACGTCTCGATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCAT 54540
|| |||||||| || || || || || | |||| || || || ||||||||
Sbjct 37899 TATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATG----CCAACGGCTACACGCAT 37954
Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600
| |||||| || || | ||| | |||||| |||||| || | || || |||
Sbjct 37955 GAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTTATGCGGAGGAGATATGAGCGTTC 38014
Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|| || ||||| ||||| | | ||| ||||| || ||||| | ||| | |||||
Sbjct 38015 CAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGCAGAGTT 38074
Query 54661 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTA---ATACT-TGAAATAATCGGAG 54716
| | |||| | | | || | || ||| | ||| ||||| |||||
Sbjct 38075 CAAATCATCCGCGTTCCTTATGACGATGTC----GTACACAGACTCGGAAATCATCGGCT 38130
Query 54717 AATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATA 54776
||||||||| || || || |||| ||||| | || ||||| | |||| || |||
Sbjct 38131 GATGTTTCCCGTTCTTGGGGTTGATATAGTCATGTAGGTCCTTGACCACTGCAGAGAATT 38190
Query 54777 GtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAAT 54836
| || || || | ||||| |||||||| ||||| || | |||||| |||||||| ||||
Sbjct 38191 GCTTCTTGGTCTGCTTGTGAAGATTTGAAACGGCGATGCGAGCGGCAAGAATGGCGTAAT 38250
Query 54837 CCGGATG 54843
| || ||
Sbjct 38251 CTGGGTG 38257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593715952223280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |