Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq579 100 3e-16 >seq579 Length=218825 Score = 100 bits (110), Expect = 3e-16 Identities = 209/302 (69%), Gaps = 12/302 (4%) Strand=Plus/Plus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||| || ||| | | |||||| ||||| || ||||| ||| || || Sbjct 69428 ACGTAGAATTGCGCAAAC-ATGTGGCAAGGCGGAAGTGCCATTTTCTTCAGATCAGCGAC 69486 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCA 145987 ||||||||| |||||| || | | | || | ||| || |||||| | | || | Sbjct 69487 ATTCCAGGCGCTGAGGATGATGCGGC-GATCGTAGGGCTTGTTCTTGAGTTTGTCCATGA 69545 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACG-TACGCG 146046 || ||| || || |||||||| ||| |||||| | | | | || || ||| || Sbjct 69546 CCTCGGCGAGTTGATCGACGCCCTGGCCCATGTAATCGGCGTCGCTG-CCGCGATACTCG 69604 Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC---GGGCTCCCTG 146103 || ||||| |||| ||| ||||| ||||| ||||| || ||||| || || | | Sbjct 69605 GCGCCGAAATGCCGCCATTGGAAACCGTATACGGGGCCGAGGTCGCCTTCGGAATG---G 69661 Query 146104 TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACG 146163 ||| ||||| | | | |||||||| | || ||||||||| ||||||||||||||| | Sbjct 69662 TGCGAGAGCCCCACGCTGTCGAGGAAGGCGCGCGACCCGTTGCCGTCCCAGATCTTGATG 69721 Query 146164 CC 146165 || Sbjct 69722 CC 69723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590071186894440