Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq412 152 4e-32
seq738 89.7 4e-13
seq11 86.0 5e-12
>seq412
Length=249799
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || |||||||| || |||||||| ||| || ||||| ||| ||
Sbjct 4318 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCA 4377
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| ||||||||||||||||||| || || ||||||||||| || |
Sbjct 4378 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGA 4437
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|||||| ||| || | |||| ||| || | ||| ||||||| ||| | || |||
Sbjct 4438 ATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCTTG 4497
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || ||||||||
Sbjct 4498 CCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 86.0 bits (94), Expect = 5e-12
Identities = 129/182 (71%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || ||||||||||| ||| || ||||| ||||||||||||
Sbjct 4552 TGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGC 4611
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| |||| | ||||| || || || || ||||||||||| || || ||
Sbjct 4612 TTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTC 4671
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACCGTTTTGCCG 118712
||| || | |||| ||| || |||| |||||||| | ||| | || || |||
Sbjct 4672 GATTTGACGTTGTCGATGGTATC---GCTCGATTCGACCTCAAGGGTAATGGTCTTACCG 4728
Query 118713 GT 118714
||
Sbjct 4729 GT 4730
>seq738
Length=174967
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||| ||| | ||||| ||||||
Sbjct 25246 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTC 25305
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|||||| || || ||| |||| | |||||| || || || || ||||||||||||||
Sbjct 25306 GAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 25362
>seq11
Length=137347
Score = 86.0 bits (94), Expect = 5e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| || |||||||| |||||
Sbjct 124744 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCG 124803
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||| |||| |||||||| || || || || |||||||||||||||||
Sbjct 124804 GCGAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTGT 124850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433826376358612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |