Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq738 95.1 1e-14 seq412 93.3 3e-14 seq11 84.2 2e-11 >seq738 Length=174967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || ||||||||| |||||||||||| || ||| | || || Sbjct 25247 ACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCG 25306 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| ||||||||||| || || | |||||||||||| | Sbjct 25307 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 25366 Query 45248 ATTTT 45252 || || Sbjct 25367 ATCTT 25371 >seq412 Length=249799 Score = 93.3 bits (102), Expect = 3e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || |||||| |||||||||||||||||||||| ||| ||| | || || || || Sbjct 4552 TGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGC 4611 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || |||||||| ||||| ||||||||||| || || | |||||||| ||| Sbjct 4612 TTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCC 4662 >seq11 Length=137347 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| |||| || || || ||||||||||| Sbjct 124749 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAA 124808 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 |||| ||||||||||| || || | ||||||||||| Sbjct 124809 GATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 124847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395071535800981