Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq738 95.1 1e-14
seq412 93.3 3e-14
seq11 84.2 2e-11
>seq738
Length=174967
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||||||||| |||||||||||| || ||| | || ||
Sbjct 25247 ACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCG 25306
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||||||||| || || | |||||||||||| |
Sbjct 25307 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 25366
Query 45248 ATTTT 45252
|| ||
Sbjct 25367 ATCTT 25371
>seq412
Length=249799
Score = 93.3 bits (102), Expect = 3e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| |||||| |||||||||||||||||||||| ||| ||| | || || || ||
Sbjct 4552 TGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGC 4611
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| |||||||| ||||| ||||||||||| || || | |||||||| |||
Sbjct 4612 TTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCC 4662
>seq11
Length=137347
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| |||| || || || |||||||||||
Sbjct 124749 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAA 124808
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| ||||||||||| || || | |||||||||||
Sbjct 124809 GATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 124847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395071535800981
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |