Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq634 84.2 4e-11 >seq634 Length=211807 Score = 84.2 bits (92), Expect = 4e-11 Identities = 168/249 (67%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||||||||| || || | ||| || || || || || || || ||| Sbjct 37728 CCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCGATG 37787 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || ||||| | | | | |||||||| ||||| | || || || |||||| Sbjct 37788 CTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCG 37847 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || || || || || || || || || || | | |||||| | ||||| || Sbjct 37848 TTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAGTTGTATGTCTCG 37907 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 ||| | | ||||||| ||||| ||||| || || |||||||| | ||||| || Sbjct 37908 ATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGAGCATGTGTTGT 37967 Query 95032 GGGCGCTCA 95040 || |||||| Sbjct 37968 GGACGCTCA 37976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989574351246755