Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq634 201 1e-46
>seq634
Length=211807
Score = 201 bits (222), Expect = 1e-46
Identities = 598/907 (66%), Gaps = 28/907 (3%)
Strand=Plus/Plus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
||||||||||| || | || | | |||| ||||| ||| | ||| || | | | |
Sbjct 37365 TCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTC 37424
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|||||||| | ||||| || || ||||| ||||| ||||||||||| ||||| ||
Sbjct 37425 CACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAC 37484
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
||||| | || | || || || || ||||| |||||| ||||| |||| |
Sbjct 37485 AAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAA-GCCAAA 37543
Query 66162 -ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220
| ||| ||||| || || | ||| ||||| | | | || || || || || || ||
Sbjct 37544 GACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACC 37603
Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280
||| || | || | ||||||||| ||||| || | | ||| || || | || |||||
Sbjct 37604 CTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGA 37663
Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTA--ATTGATAGA 66338
|| || || || || ||| || || | ||||| || | | |||| |||
Sbjct 37664 CGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTG--AGA 37721
Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCC 66397
|| || || || || | || ||||| | ||||| ||| || | ||| || ||||||||
Sbjct 37722 CCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA-CGTCTTCAGCGTGTCGTAGATGCC 37780
Query 66398 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAG 66456
|| || || |||||| | || | | || || ||| ||||| || | | | | |
Sbjct 37781 TTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGT-G 37839
Query 66457 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTG 66515
|||| || || || | || ||||| ||||| || || |||| | || | |||| |||
Sbjct 37840 TTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAG-TTG 37898
Query 66516 TACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCAT 66571
|| ||||| || || || || || || | |||| || || || ||||||||
Sbjct 37899 TATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATG----CCAACGGCTACACGCAT 37954
Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 66631
| |||||| || || | ||| | |||||| |||||| | | || || |||
Sbjct 37955 GAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTTATGCGGAGGAGATATGAGCGTTC 38014
Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
|| || ||||| ||||| | | ||| ||||| || ||||| | ||| | |||||
Sbjct 38015 CAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGCAGAGTT 38074
Query 66692 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTA---ATACT-TGAAATAATCGGAG 66747
| | |||| | | | || | || ||| | ||| ||||| |||||
Sbjct 38075 CAAATCATCCGCGTTCCTTATGACGATGTC----GTACACAGACTCGGAAATCATCGGCT 38130
Query 66748 AATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 66807
||||||||| || || || |||| ||||| || |||| | |||| || |||
Sbjct 38131 GATGTTTCCCGTTCTTGGGGTTGATATAGTCATGTAGGTCCTTGACCACTGCAGAGAATT 38190
Query 66808 GtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAAT 66867
| || || || | ||||| |||||||| ||||| || | |||||| | |||||| ||||
Sbjct 38191 GCTTCTTGGTCTGCTTGTGAAGATTTGAAACGGCGATGCGAGCGGCAAGAATGGCGTAAT 38250
Query 66868 CCGGATG 66874
| || ||
Sbjct 38251 CTGGGTG 38257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658166539131240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |