Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq634 230 3e-55
seq46 129 8e-25
>seq634
Length=211807
Score = 230 bits (254), Expect = 3e-55
Identities = 1325/2081 (64%), Gaps = 57/2081 (3%)
Strand=Plus/Plus
Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765
|||| ||| | ||||||||||| ||||| || |||| | || || || ||||| |
Sbjct 36201 TCCTGGTCGACGGTGAATTGAATAGGAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGG 36260
Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825
|| || || ||||| || |||||||| ||| ||||| || | ||| |
Sbjct 36261 CCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGCATCGATGTAATCTTGCCCATGGTA 36320
Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885
|| || || || || || | || || |||||||||||||| || | ||| ||
Sbjct 36321 GGCTCCTTCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCG 36380
Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945
||||| | ||||| || || | |||||||| | || || || | ||| ||
Sbjct 36381 GCCATCTGAATGATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCTTGATT 36440
Query 78946 TCTTCTGGAAGGTTTGTATTC---TGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|| || |||| ||| | | || || ||||| |||||||| || || || | |||||
Sbjct 36441 TCATCGGGAATGTTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTC 36500
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| | ||| ||| | | || ||| | | ||||| || || || ||
Sbjct 36501 ATGTTGTCAGACCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACC 36560
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
|| || || || | ||| || | || | ||| || || |||||||||||| | ||
Sbjct 36561 TGGAACTCGCCGGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCAT 36620
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182
||||| | || | |||||| | || || || || ||||| || || || || | | |
Sbjct 36621 TCATTGTAGCCAAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAAC-AAGCAGCGA 36679
Query 79183 TTT-CTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCA 79239
|| | || ||| ||| | || || || | || |||| ||||| ||||| || ||
Sbjct 36680 GTTGCGAACACC--ATGCTGTGCGATCTTTGCCTTGAGAGCATCCCAGTCCCAGAGGTCG 36737
Query 79240 GACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGT 79298
| || | |||||| | ||||||||| || || || | | || | || ||
Sbjct 36738 GTGGGCGTGATATTCCACATATCATATTGAAGTATGCCCTG-CGAGACAGGAGAGCCCTC 36796
Query 79299 GTATGTTTCATAAGGTCC---TTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCC 79355
||| |||||||| || || |||||| ||| | || ||| || | || |
Sbjct 36797 GTAAGTTTCATATGGACCAAGTTCCTT---GGCCAGATCGCAAGACGATGTGAGAGCAGC 36853
Query 79356 GTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG 79415
|| || ||||| || || |||| | ||||| | |||||| | || || ||
Sbjct 36854 GTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAAGGG 36913
Query 79416 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 79475
| | | || || || || | || || || |||| ||||| ||| || ||
Sbjct 36914 CAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTG 36973
Query 79476 TCTCTTATTAGAAATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 79534
||| || | || | |||||| |||| || || | ||| | || ||||| || |
Sbjct 36974 TCTGAAGTT-GCTGTTGCGAGCTTCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGT 37032
Query 79535 TGAGATTCCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTC- 79591
| ||||| | || | | || | ||| || || | || || | |||||| | ||| |
Sbjct 37033 TCAGATTAC-GAGTGACGACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTCGCCA 37091
Query 79592 -----CATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646
||| | ||| || | || | || |||| || || ||||| |||||
Sbjct 37092 CGTTGCATGTCC-ACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTC 37150
Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706
|| | | | || | || || || |||||||||||| | ||| ||||| |
Sbjct 37151 ATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAG 37210
Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766
|| | || || || || ||| || |||||||| || || || |||| | |||||
Sbjct 37211 GTTCTTCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGT 37270
Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGA-GCCTTTATTATAGACTTG 79824
|| |||| | || | || || | ||||| | || | || | | | || |
Sbjct 37271 CTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCTGGGCGCGCACAGTCT---CTCG 37327
Query 79825 TATCTCTTTTCTCTT--TCGTA-TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881
| | | | ||| || || ||||| ||| | ||||||||||| || | ||
Sbjct 37328 TC-CGCGTCCCTCGGCCTCATACTTGTG-ATACAGCTCCTCGAACTCGTCGCCATAGACG 37385
Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941
||| | || ||||| ||||| || || | | | ||||||||||| ||||| ||
Sbjct 37386 TCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACC 37445
Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001
|| ||||| ||||| ||||||||||| ||||| || | ||| | || | |||
Sbjct 37446 CGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCT 37505
Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTC 80060
|| || || ||||| |||||| ||||| |||| | | ||| | ||||| || ||
Sbjct 37506 TCCTTGCCATGGTTCTTGCGAAGATCAAGGAA-GCCAAAGACATCGGCGTGCCATGGCTC 37564
Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120
| ||| ||||| | | | || || || || || || ||||| || | || | ||||||
Sbjct 37565 GAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGT 37624
Query 80121 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 80180
||| ||||| || | | ||| || || | || ||||| || || || || || |||
Sbjct 37625 GTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGAT 37684
Query 80181 ATAGCTTCCACTGGCACGAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTA 80238
|| || ||||||| || | | |||| ||||| || || || || | ||
Sbjct 37685 GTATGAGCCGGTGGCACGGATGCGATGAACATTG--AGACCAATACCGCCAGCGGTCTTG 37742
Query 80239 GAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCAT 80297
||||| | ||||| ||| || | ||| || |||||||| || ||||| ||||| | ||
Sbjct 37743 GAGATCATAGCGCA-CGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGAT 37801
Query 80298 GTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTCCCGCATTAAATAAGGTAG 80356
| | || || ||| ||||| || | | | | ||||| || || || | || |
Sbjct 37802 ATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGT-GTTCCGGCGTTGAAAAGCGTTG 37860
Query 80357 GAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCT 80415
|||| ||||| || || |||| | |||| |||| ||||| ||||| || || ||||
Sbjct 37861 GAGACGCGTGTGTGAAGTATTTGTTGGACATGTAG-TTGTATGTCTCGATGGC--CTTCT 37917
Query 80416 ATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 80473
|| | | | || || || || || |||||||| | |||||| || || | |||
Sbjct 37918 CGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGAGCATGTGTTGTGGACGCTCAG 37977
Query 80474 CGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGT 80533
| |||||| ||||| | | || || ||||| || ||||| ||||| | |
Sbjct 37978 CAATCTTGCCGTTTATGCGGAGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAAAGAACT 38037
Query 80534 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAA 80593
||| ||||| || ||||| | ||| | ||||| | | |||| | | | |
Sbjct 38038 GGTAGTTGAAGTCGCGATCGTACACGATAGCAGAGTTCAAATCATCCGCGTTCCTTATGA 38097
Query 80594 CTACATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 80652
| | | | | | ||| ||||| ||||| ||||||||| || || || || | |
Sbjct 38098 CGATGT-CGTACACAGACTCGGAAATCATCGGCTGATGTTTCCCGTTCTTGGGGTTGATA 38156
Query 80653 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 80712
|||| || |||| | |||| || ||| | || || || | |||||| ||||||
Sbjct 38157 TAGTCATGTAGGTCCTTGACCACTGCAGAGAATTGCTTCTTGGTCTGCTTGTGAAGATTT 38216
Query 80713 GATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
|| ||||| || | ||||| | |||||| |||||||| ||
Sbjct 38217 GAAACGGCGATGCGAGCGGCAAGAATGGCGTAATCTGGGTG 38257
>seq46
Length=404262
Score = 129 bits (142), Expect = 8e-25
Identities = 118/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| ||||| ||| ||||| |||||||| | | || ||||||||||| || |||||
Sbjct 337793 CACGCGAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGG 337734
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| ||||| ||||| || | ||| || |||||||| || || || || ||||||
Sbjct 337733 CCGGGCATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAG 337674
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
|| |||||||| ||||| |||||||| ||
Sbjct 337673 ATGCCTTCTACGGCGGCGAAGGCAACGAG 337645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718261967468040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |