Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq412 82.4 6e-11 >seq412 Length=249799 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || || || ||| ||| || || |||||||| || | || || | || || Sbjct 4318 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCA 4377 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| ||| || | || | ||||||||||||| || | | ||||| ||| | Sbjct 4378 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGA 4437 Query 48638 ATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||||| |||| | | || |||||||||| |||||| ||||| || || || | Sbjct 4438 ATTTTTGATTTGACGTTGTCG--ATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCT 4495 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| || || || || || |||||||| Sbjct 4496 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247293026761