Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq412 89.7 5e-13
>seq412
Length=249799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855
||||||||||| ||| || ||||| || | ||| || || | || ||| | |||
Sbjct 4089 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG--AGAGCGTTCGGCCGTCC 4146
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||| ||| || || ||||||| | | |||||| || || |||||||| ||||| ||
Sbjct 4147 TCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTTATCC 4206
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| || || | ||| ||| | ||| ||||| | || || || | |||||| ||
Sbjct 4207 TGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGATCGTC 4266
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || || |||||||||||
Sbjct 4267 TTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || |||| |||||||| | || || || || || | ||| || ||| |
Sbjct 4300 CCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4359
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || ||||| || ||| | ||||| | | |||||||| || |||
Sbjct 4360 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 4419
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || || || | |||||||| |||||| | ||| || || | || ||
Sbjct 4420 ATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACC 4479
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || || || || || || || || |||||||||||
Sbjct 4480 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448286935629960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |