Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq81 178 2e-40
seq401 105 1e-18
>seq81
Length=91100
Score = 178 bits (196), Expect = 2e-40
Identities = 189/247 (77%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| ||||||| ||| |||||| || ||||| || || ||||||||||| |||||
Sbjct 11642 GCCAAGCGCCATCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTAT 11584
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || ||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 11583 CCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAGGAGAC 11524
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || |||| |||||| || || |||||
Sbjct 11523 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGGGATGCTGTCACATACACCGA 11464
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || || ||||| || || ||| | || |||||||||| | || || |||||
Sbjct 11463 GCATGCCAAGCGCAAGACCGTTACTTCCCTCGACGTCGTCTATGCTCTCAAGCGACAAGG 11404
Query 16672 CCGTAAG 16678
||||||
Sbjct 11403 GCGTAAG 11397
>seq401
Length=249862
Score = 105 bits (116), Expect = 1e-18
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || |||||||| || || |||||||| || |
Sbjct 153428 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATAACCAAGCCTGCCA 153370
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
|||||||||| ||||||||||| || ||||||||| ||||
Sbjct 153369 TCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTC 153330
Score = 100 bits (110), Expect = 4e-17
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | |||| ||||||| ||| ||| |||| |||||
Sbjct 153272 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGAGCGTCATCCGTGATG 153213
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || ||||||||||| || || ||||| ||||| ||| |||| |||| || |
Sbjct 153212 CCGTCACATACACCGAGCACGCCAAGCGCAAGACCGTCACGTCCCTGGACGTCGTATACG 153153
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | || || || ||||||| | || || || || ||||| | |||
Sbjct 153152 CTCTCAAGCGCCAGGGCCGTACCCTCTACGGGTTCGGTGGTTAAGCATCT 153103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074504212373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |