Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq634 426 4e-114 >seq634 Length=211807 Score = 426 bits (472), Expect = 4e-114 Identities = 1151/1742 (66%), Gaps = 48/1742 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| || || || || ||| | |||||||| || |||| ||||| || || Sbjct 37981 ATTGCTGAGCGTCCACAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAAGAC 37922 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCA 363559 | || || || || ||||| || || | | || | | || ||||| ||||| Sbjct 37921 ATCGAGAAGGCCATCGAGACATACAA-CTAC-ATGTCCAACAAATACTTCACACACGCGT 37864 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 | ||||| | | ||| || ||||| | || ||||||||||| || ||||| || | Sbjct 37863 CTCCAACGCTTTTCAACGCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATCG 37804 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | || ||||| || |||||| || |||| ||||| || |||| || ||| | || | Sbjct 37803 ATATCAAGGATGACAGCATCGAAGGCATCTACGACACGCTGAAGACGTGCGCTATGATCT 37744 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTT 363736 |||||| || ||||| |||||| | | || || | | ||||| || | | | Sbjct 37743 CCAAGACCGCTGGCGGTATTGGTCT--CAATGTTCATCGCATCCGTGCCACCGG-CTCAT 37687 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 |||| | || || ||| || || || || | || ||||||||||| | | ||| Sbjct 37686 ACATCGGTGGAACGAACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACA 37627 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | || || | || |||||||||||||| |||||| ||| || || || || || | Sbjct 37626 ACACCGCTCGTTATGTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACC 37567 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 ||||||| || |||||| | |||| || ||||| || || || ||| || || | Sbjct 37566 TCGAGCCATGGCACGCCGATGTCTTTGGCTTCCTTGATCTTCGCAAGAACCATGGCAAGG 37507 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 | || | || || |||||| ||||||| || || ||| || |||||| || ||||||| Sbjct 37506 AAGAGATCCGCGCCCGTGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGC 37447 Query 363977 GCGTGGAGGCAGGTAA--GA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 | || || | ||| || | ||| | || || ||||| ||||| || || | Sbjct 37446 GGGTCCAG---GATAATGGAGAGTGGACTCTTTTCTGCCCGAACGAAGCCCCTGGGTTGG 37390 Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093 |||| || | || ||||| | | | || || | |||||||| | |||||| | Sbjct 37389 CCGACGTCTATGGCGACGAGTTCGAGGAGCTGTATCACAAGTATGAGGCCGAGGGACGCG 37330 Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153 || |||| | | ||| |||||||| |||| |||||| | || | |||| |||| Sbjct 37329 GACGAGAGACTGTGCGCGCCCAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGA 37270 Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 | |||| || |||||| | ||||| ||| | ||||||||||| ||||||| || ||| Sbjct 37269 CTGGAAACCCGTATATGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACC 37210 Query 364214 TTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 | || || |||| |||| | ||||| || |||||||| ||||| |||||||| ||||| Sbjct 37209 TCGGAACTATTC-GCAGCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGAT 37151 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGAT 364326 ||| |||||| || ||| | || ||| | || || || |||| || | || | Sbjct 37150 GAGGTTGCCGTCTGCAACTTGGCCTCGCTTGCACTCCCTGCGTATGTGGACATGCAACGT 37091 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386 || | ||| |||| | || | || || | | | ||| | ||||| || Sbjct 37090 GGCGAGTATGATTTCCAGAAGCTCCACGAAGTCGTCCAGGTCGTCACTCGTAATCTGAAC 37031 Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGC 364441 ||| ||||||| ||| | || || |||||||||| || ||| || | Sbjct 37030 AAGATTATCGAGGTCAATCACTACCCGGTTCCTGAAGCTCGCAACAGC-----AACTTCA 36976 Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGA 364501 | || | || | |||||||| || ||||| || || || | || | || Sbjct 36975 GACACAGGCCTGTCGGTCTTGGAGTCCAGGGTCTTGCGGATGCCTTCCTCGCCCTGCGCC 36916 Query 364502 TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATT 364561 || | || || || || || || | || || | |||||||||| || || || Sbjct 36915 TGCCCTTCGACTCTCCCGAAGCAAGGAAGCTCAACACCCAGATCTTTGAGACCATCTACC 36856 Query 364562 TTGCCGCAATGACTGCTTCGTGTGATTTGG-CAAAAACCAAGGGAAAGTACTCTACTTAT 364620 || || | || | || || ||| ||| ||| | | || | || ||||| Sbjct 36855 ACGCTGCTCTCACATCGTCTTGCGATCTGGCCAAGGAACTTGGTCCA-TATGAAACTTAC 36797 Query 364621 GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT 364680 ||||| || ||| | |||||||| | | | || | |||| | |||||| ||||||| | Sbjct 36796 GAGGGCTCTCCTGTCTCGCAGGGCATACTTCAATATGATATGTGGAATATCACGCCCACC 36737 Query 364681 GTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGC 364734 | || ||| |||||||| | || ||| | |||| |||||||| |||| Sbjct 36736 GACCTCTGGGACTGGGATGCTCT------CAAGGCAAAGATCGCACAGCATGGTGTTCGC 36683 Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794 ||||| || || || |||||||| || || || || | || || || || |||| Sbjct 36682 AACTCGCTGCTTGTTGCCCCCATGCCTACTGCCTCCACATCCCAAATTCTTGGCTACAAT 36623 Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854 || ||||||||||| | ||| ||| | || || ||||| ||| | |||| || || Sbjct 36622 GAATGCTTCGAACCATATACCTCCAACATCTACTCCCGCCGTGTTTTGGCCGGCGAGTTC 36563 Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914 | ||| || || | || | |||||| | ||| || |||||| ||||| | Sbjct 36562 CAGGTCGTCAACCCCTGGCTCCTGAAGGATTTGGTTGACATGGGCCTGTGGTCTGACAAC 36503 Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA 364974 ||||||||| |||||||||| | |||||| | |||| ||||| |||| || Sbjct 36502 ATGAAGAACCGCATCATCGCCGATGGTGGTTCCATCCAGAGGATTCCTAACATTCCCGAT 36443 Query 364975 GATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATG 365034 || | ||| | | ||||| ||||| |||||||| ||| ||| || ||||| | ||| Sbjct 36442 GAAATCAAGGCGCTATACAAGACCGTGTGGGAAATCTCCCAGCGTACCATCATTCAGATG 36383 Query 365035 GCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG 365094 || || || || || || || ||| |||| ||||||| | ||| | ||||| || Sbjct 36382 GCCGCTGACCGTGGCGCCTTCATCGATCAGTCCCAGTCGCTCAACATTCACATGAAGGAG 36323 Query 365095 CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACA 365154 || ||| | |||| ||||||| ||||| ||| ||| ||||| ||||| ||||| Sbjct 36322 CCTACCATGGGCAAGATTACATCGATGCACTTCGCCGGATGGAAGCTTGGTCTCAAGACC 36263 Query 365155 GG 365156 || Sbjct 36262 GG 36261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303340891895102