Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq634 174 1e-38
seq412 129 6e-25
seq46 111 1e-19
seq738 102 8e-17
seq11 98.7 9e-16
>seq634
Length=211807
Score = 174 bits (192), Expect = 1e-38
Identities = 924/1447 (64%), Gaps = 43/1447 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||||||||| ||||| || | || | ||| || || | |||
Sbjct 36552 TTGACGACCTGGAACTCGCCGGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGT 36611
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | || || | ||| || ||||| | || | || || |||||| || ||
Sbjct 36612 TCGAAGCATTCATTGTAGCCAAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACA 36671
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | || |||| ||| | | |||| || | | |||| |||||
Sbjct 36672 AGCAGCGAGTTGCGAACACCATGCTGTGCGATCTTTGCCTTGAGAGCATCCCAGTCCCAG 36731
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| || ||| | | | |||||| || || || | ||||||| | | || |
Sbjct 36732 AGGTCGGTGGGCGTGATATTCCACATATCATATTGAAGTATGCCCTGCGAGACAGGAGAG 36791
Query 145298 CCTTGAAAGGAACTGTAAC-TGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGA 145354
|| | | || | | | || ||||||| ||||| || |||||| || |||
Sbjct 36792 CCCTC---GTAAGTTTCATATGGACCAAGTTCCTTGGCCAGATCGCAAGACGATGTGAGA 36848
Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414
|| || || || ||||| || || |||||||| | | ||||| |||
Sbjct 36849 GCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCG 36908
Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474
| |||| |||||| | || ||||| || || ||||| | ||| | |||| |||
Sbjct 36909 AAGGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGC 36968
Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534
| ||| | | |||||| | | || | || || |||| ||||||||
Sbjct 36969 CTGTGTCTGAAGTTGCTGTTGCGAGCTTCAGGAACCGGGTAGTGATTGACCTCGATAATC 37028
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||| || || || |||| | | | | ||| | || ||| ||
Sbjct 37029 TTGTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTC- 37087
Query 145595 GCCTCGTCA-ACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653
||| ||| | | ||||| | | || || | ||| ||||| || || || ||
Sbjct 37088 GCCACGTTGCATGTCCACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAAC 37147
Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG---ATGGT 145710
||| |||| || |||| | | |||||||| ||| | || | | || || ||
Sbjct 37148 CTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTT---AGAGCTGCGAATAGT 37204
Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770
||| || || | ||| || ||||| | |||||| || |||||||||||||| |||||
Sbjct 37205 TCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTT 37264
Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGC 145828
|||||||| ||| | ||| | ||| || || || | ||| || ||||| |
Sbjct 37265 TCCAGTCTCGGTCTGGGCCTCGAGGATGG--CGTACCAGAGCTTCTGGGCGCGCACAGTC 37322
Query 145829 TGCTGGTA-GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887
| || || ||| ||||| | || || || || |||||||| ||| || || ||
Sbjct 37323 T-CTCGTCCGCGTCCCTCGGCCTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATA 37381
Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947
| |||| || || || | ||| || || | || | ||| | || || | |
Sbjct 37382 GACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTG 37441
Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007
||| |||| ||| || | || || | |||||| ||||| | ||| || || || |
Sbjct 37442 GACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGAT 37501
Query 146008 ATCCTCAGCACCCATGTTTCGCTTCAA-ATTAAGCACACTATAGATGTCCGCGTGCCACG 146066
|| || || ||| ||| || || ||| | | | ||| || |||||||| |
Sbjct 37502 CTCTTCCTTGCC-ATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATG 37560
Query 146067 GTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGTGACGTA 146123
| || | |||| ||||| || ||| || || |||||||||||| || | |||
Sbjct 37561 GCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAG 37620
Query 146124 CCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACG--CCGTTCGT--- 146178
| |||||||| |||| || | ||| || || |||| ||| ||| ||||||||
Sbjct 37621 CGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGG--ACGTTCCGTTCGTTCC 37678
Query 146179 AGAGTT-TATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGC 146237
| | | ||| | |||| || || | || ||||||||| | || | ||||||
Sbjct 37679 ACCGATGTAT----GAGCCGGTGGCACGGATGCGATGAACATTGAGACCAATACCGCCAG 37734
Query 146238 CGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG 146296
|| |||||| || ||||| ||| | ||||| ||||||||||| || ||||| ||
Sbjct 37735 CGGTCTTGGAGATCATAGCGCACGTCTTC-AGCGTGTCGTAGATGCCTTCGATGCTGTCA 37793
Query 146297 -CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355
| | || | ||| || ||||| ||| ||||||| | | || || || || |||
Sbjct 37794 TCCTTGA-TATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAA 37852
Query 146356 CAACGTCGGGCTCGCGTGCGTAAAC-ATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414
| ||| || |||||| || || |||| | || ||| || || ||||| |
Sbjct 37853 AAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGA-CATGTAGTTGTATGTCTCGATGG 37911
Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474
| | | ||||| ||||| || ||||| | || || ||||||||||||||||| || |
Sbjct 37912 CCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGAGCATGTGTTGTGGAC 37971
Query 146475 GCTCCGC 146481
|||| ||
Sbjct 37972 GCTCAGC 37978
>seq412
Length=249799
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| || || || | ||| ||||| || || |||||||| ||| |
Sbjct 4300 CCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4359
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| | ||||||||| ||||| ||
Sbjct 4360 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 4419
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || ||| ||| || |||| | || | ||||||| ||||| |
Sbjct 4420 ATGCCCTCCTTATC-CTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCAC 4478
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || ||||| || || || ||||| ||||||||
Sbjct 4479 CTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | || |||||||| ||||||||||| ||| |
Sbjct 4528 CCACCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 4587
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| || ||||| ||||| || |||
Sbjct 4588 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGG 4647
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| ||| |||| | || | |||||| | || ||||
Sbjct 4648 ATGCCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCGATGGTATCGCTCGATTCGACC 4707
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||||| ||| ||||||||
Sbjct 4708 TCAAGGGTAATGGTCTTACCGGT 4730
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | ||| | || |||||||| || |||||||| ||| |
Sbjct 4811 CCACCGCGGAGACGAAGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 4870
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| ||||||||||||||| | || || ||||| ||||| || |||
Sbjct 4871 AGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGGG 4930
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| ||| ||||| | || | || || | |||||| |
Sbjct 4931 ATGCCTTCCTTATCCTGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCACC 4990
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | ||| || |||||
Sbjct 4991 TCCAAGGTGATGGTCTTGCCGGT 5013
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| || || | ||||||||||| || |||||||| ||
Sbjct 4072 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 4131
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| | |||||| || || |||| | ||| ||||||||||| ||
Sbjct 4132 AGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGA 4191
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || ||||| || ||| || ||| | | || | || |||| ||||| |
Sbjct 4192 ATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACC 4251
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| || || || ||||| ||||||||
Sbjct 4252 TCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
>seq46
Length=404262
Score = 111 bits (122), Expect = 1e-19
Identities = 250/367 (68%), Gaps = 13/367 (4%)
Strand=Plus/Plus
Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293
||| ||||||||||||| || || |||||| || ||||| || ||||||||| ||||
Sbjct 337720 GGCCTCATGCCCGGCCTCACCTTCTCCAACGAACTCATATCTCGTGACGAGGGCATGCAC 337779
Query 46294 ACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACACC 46353
|| ||||| ||||| || ||| | ||| | | | | ||| | | || | | |
Sbjct 337780 ACCGACTTCGCGTGCCT--ACTCTT---CTCTC-TCCTCAACACACGTCCGTCGCAAAAG 337833
Query 46354 GTGCT-GAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCA 46410
| | ||| ||| ||| || || || |||| ||| | ||||| | || | ||
Sbjct 337834 GAAGTCGAGGCCATCATCACCGAAGCTGTCACCATCGAGCAAGAGTTCCTCACAGAAGCT 337893
Query 46411 CTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTA 46470
|| || ||| || || ||||||||| | || |||||| | ||||||||||| ||
Sbjct 337894 CTACCGTGTGCTCTTCTCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTC 337953
Query 46471 GCGGACCGACTGCTCGTGCAGCT-TCACCAGCCGAAGCATTTTC-ACGCGCGCAATCCAT 46528
|| ||||| |||||| || ||| || || || || | | | |||| ||| || |
Sbjct 337954 GCCGACCGCCTGCTCTTG--GCTCTCGGCAACCAAAAGTTCTACAACGCCACCAACCCCT 338011
Query 46529 TTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCG 46588
| || || ||| | |||||||| |||| || || || || || ||||| ||| | ||||
Sbjct 338012 TCGACTTCATGGAGAACATCTCGCTGGCCGGTAAGACAAACTTCTTCGAGAAGAGGGTCG 338071
Query 46589 GCGAGTA 46595
| || ||
Sbjct 338072 GTGATTA 338078
>seq738
Length=174967
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| || || | ||||||||||| || |||||||| |||
Sbjct 25229 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 25288
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| |||||||| |||||||| ||
Sbjct 25289 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGA 25348
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 25349 ATGCCCTCCTTGTC 25362
>seq11
Length=137347
Score = 98.7 bits (108), Expect = 9e-16
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | |||||||||||| || |||||||| |||
Sbjct 124714 CCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 124773
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || |||||||| || ||| |||| | |||||| ||||| || ||
Sbjct 124774 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGA 124833
Query 131128 ATTCCTTCTTTGTCGGTGA 131146
|| || || ||||| ||||
Sbjct 124834 ATGCCCTCCTTGTCTGTGA 124852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472008309978240
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