Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq412 91.5 1e-13 >seq412 Length=249799 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | ||| |||| || || |||||||| || || ||||||||||||| | Sbjct 4300 CCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4359 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | || ||||| || | || || ||||| || ||| || Sbjct 4360 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 4419 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| || || ||||| || || | | | | || ||| | |||| Sbjct 4420 ATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACC 4479 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||| || || |||||||| || ||||| || ||||||||| Sbjct 4480 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || ||||||||||| | | ||| | ||||| Sbjct 4087 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGGCCGTCC 4146 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || || || || |||||| || | |||||||| || Sbjct 4147 TCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTTATCC 4206 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | |||||| | | | | |||||| | ||| || | ||||| || Sbjct 4207 TGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGATCGTC 4266 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 4267 TTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084242935390